Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:91648551-92049477

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ston2 12 91633009 to 91786436 153427 - protein coding gene stonin 2
Tssr114594 12 91667002 to 91667017 15 + TSS region transcription start site region 114594
Tssr114595 12 91668784 to 91668794 10 + TSS region transcription start site region 114595
Gm8378 12 91674812 to 91686113 11301 - sense intronic lncRNA gene predicted gene 8378
D12Mit179 12 91675705 to 91675853 148 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 179
Gm16876 12 91681754 to 91687960 6206 + antisense lncRNA gene predicted gene, 16876
Tssr117220 12 91686089 to 91686104 15 - TSS region transcription start site region 117220
Tssr117221 12 91686105 to 91686149 44 - TSS region transcription start site region 117221
Tssr114596 12 91695022 to 91695042 20 + TSS region transcription start site region 114596
Tssr117222 12 91696380 to 91696384 4 - TSS region transcription start site region 117222
Tssr117223 12 91745954 to 91745977 23 - TSS region transcription start site region 117223
Tssr117224 12 91746020 to 91746089 69 - TSS region transcription start site region 117224
Gm34718 12 91756833 to 91757686 853 + lncRNA gene predicted gene, 34718
Tssr114597 12 91757023 to 91757036 13 + TSS region transcription start site region 114597
Tssr114598 12 91757268 to 91757274 6 + TSS region transcription start site region 114598
Gm2347 12 91757271 to 91758651 1380 protein coding gene predicted gene 2347
Cpgi4957 12 91778483 to 91779448 965 CpG island CpG island 4957
Tssr117225 12 91779129 to 91779144 15 - TSS region transcription start site region 117225
Tssr117226 12 91788333 to 91788343 10 - TSS region transcription start site region 117226
Tssr117227 12 91788366 to 91788376 10 - TSS region transcription start site region 117227
Gm22015 12 91791610 to 91791674 64 - miRNA gene predicted gene, 22015
Tssr117228 12 91804371 to 91804376 5 - TSS region transcription start site region 117228
Sel1l 12 91806043 to 91849157 43114 - protein coding gene sel-1 suppressor of lin-12-like (C. elegans)
D12Mit259 12 91846584 to 91846708 124 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 259
Cpgi4958 12 91848551 to 91849477 926 CpG island CpG island 4958
Tssr117229 12 91849081 to 91849154 73 - TSS region transcription start site region 117229
Gm21051 12 91870143 to 91871830 1687 - pseudogene predicted gene, 21051
Gm18621 12 91872965 to 91873643 678 - pseudogene predicted gene, 18621
Rpl31-ps1 12 91890896 to 91891273 377 - pseudogene ribosomal protein L31, pseudogene 1
Gm21614 12 91968399 to 91969577 1178 - pseudogene predicted gene, 21614
D12Jpk1 12 92001088 to 92001225 137 DNA segment DNA segment, Chr 12, Japan, Kominami 1
Tssr114599 12 92005561 to 92005565 4 + TSS region transcription start site region 114599
Gm47984 12 92008604 to 92009175 571 - pseudogene predicted gene, 47984
Gm40548 12 92010419 to 92012411 1992 + lincRNA gene predicted gene, 40548