Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:90848492-91534409

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Splwt1 12 41646392 to 90920752 49274360 QTL spleen weight 1
4930544I03Rik 12 90753208 to 90969798 216590 - lincRNA gene RIKEN cDNA 4930544I03 gene
Adip6 12 90920648 to 90920752 104 QTL adiposity 6
D12Mit6 12 90920648 to 90920752 104 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 6
Skull18 12 90920648 to 90920752 104 QTL skull morphology 18
Gm47688 12 90938235 to 90938382 147 - pseudogene predicted gene, 47688
Tssr117194 12 90969781 to 90969790 9 - TSS region transcription start site region 117194
Tssr117195 12 90969798 to 90969811 13 - TSS region transcription start site region 117195
Tssr114583 12 90969894 to 90969904 10 + TSS region transcription start site region 114583
1700105G05Rik 12 90969949 to 90971518 1569 + lincRNA gene RIKEN cDNA 1700105G05 gene
Tssr114584 12 90972845 to 90972855 10 + TSS region transcription start site region 114584
Gm26477 12 90981225 to 90981547 322 + unclassified non-coding RNA gene predicted gene, 26477
Cep128 12 90998492 to 91384409 385917 - protein coding gene centrosomal protein 128
Tssr117196 12 91030070 to 91030103 33 - TSS region transcription start site region 117196
Tssr117197 12 91040583 to 91040614 31 - TSS region transcription start site region 117197
5430427M07Rik 12 91045848 to 91056636 10788 + antisense lncRNA gene RIKEN cDNA 5430427M07 gene
Tssr117198 12 91063375 to 91063389 14 - TSS region transcription start site region 117198
Tssr117199 12 91099710 to 91099715 5 - TSS region transcription start site region 117199
Tssr117200 12 91110252 to 91110255 3 - TSS region transcription start site region 117200
Gm44370 12 91123252 to 91123363 111 + miRNA gene predicted gene, 44370
Gm18968 12 91142787 to 91143648 861 + pseudogene predicted gene, 18968
Gm47742 12 91159861 to 91160273 412 + pseudogene predicted gene, 47742
Tssr117201 12 91215768 to 91215772 4 - TSS region transcription start site region 117201
D12Mit47 12 91217169 to 91217324 155 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 47
Tssr117202 12 91266056 to 91266059 3 - TSS region transcription start site region 117202
D12Mit194 12 91287446 to 91287553 107 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 194
Gm18388 12 91323706 to 91324225 519 + pseudogene predicted gene, 18388
Tssr117203 12 91330219 to 91330222 3 - TSS region transcription start site region 117203
Tssr3912 12 91357332 to 91357338 6 - TSS region transcription start site region 3912
Cpgi4952 12 91383961 to 91384605 644 CpG island CpG island 4952
Tssr117204 12 91384311 to 91384336 25 - TSS region transcription start site region 117204
Tssr117205 12 91384346 to 91384360 14 - TSS region transcription start site region 117205
Tssr117206 12 91384370 to 91384397 27 - TSS region transcription start site region 117206
Tssr117207 12 91384403 to 91384430 27 - TSS region transcription start site region 117207
Cpgi4953 12 91400383 to 91401218 835 CpG island CpG island 4953
Tssr114585 12 91400438 to 91400452 14 + TSS region transcription start site region 114585
Tssr114586 12 91400466 to 91400477 11 + TSS region transcription start site region 114586
Tssr114587 12 91400990 to 91401022 32 + TSS region transcription start site region 114587
Tshr 12 91400993 to 91540509 139516 + protein coding gene thyroid stimulating hormone receptor
Tssr114588 12 91401024 to 91401038 14 + TSS region transcription start site region 114588
Tssr114589 12 91404022 to 91404053 31 + TSS region transcription start site region 114589
Gm18827 12 91482053 to 91482839 786 + pseudogene predicted gene, 18827
D12Mit119 12 91509807 to 91509956 149 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 119
D12Mit118 12 91512194 to 91512321 127 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 118
Gm40541 12 91534090 to 91537158 3068 - lncRNA gene predicted gene, 40541
Ccs1 12 100056850 to 90920648 -9136202 QTL colon cancer susceptibility 1
Bbaa27 12 107342134 to 91287446 -16054688 QTL B.burgdorferi-associated arthritis 27
Pwgrq7 12 108679049 to 90970593 -17708456 QTL pre-weaning growth rate QTL 7