Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:87408077-87463839

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm33444 12 87383582 to 87410739 27157 + lncRNA gene predicted gene, 33444
Cpgi4942 12 87408149 to 87408310 161 CpG island CpG island 4942
Tssr114524 12 87420464 to 87420468 4 + TSS region transcription start site region 114524
Gm8557 12 87420511 to 87420985 474 + pseudogene predicted gene 8557
Tssr117177 12 87421014 to 87421016 2 - TSS region transcription start site region 117177
Alkbh1 12 87428077 to 87443839 15762 - protein coding gene alkB homolog 1, histone H2A dioxygenase
Mir3068 12 87437679 to 87437757 78 - miRNA gene microRNA 3068
Gm29362 12 87437684 to 87437816 132 - lincRNA gene predicted gene 29362
2700073G19Rik 12 87442848 to 87444017 1169 - protein coding gene RIKEN cDNA 2700073G19 gene
Cpgi4943 12 87443320 to 87444036 716 CpG island CpG island 4943
Tssr117178 12 87443800 to 87443850 50 - TSS region transcription start site region 117178
Slirp 12 87443896 to 87449924 6028 + protein coding gene SRA stem-loop interacting RNA binding protein
Tssr114525 12 87443904 to 87443934 30 + TSS region transcription start site region 114525
Snw1 12 87449910 to 87472299 22389 - protein coding gene SNW domain containing 1
Tssr117179 12 87459448 to 87459486 38 - TSS region transcription start site region 117179