Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:86888088-87078108

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4927 12 86888043 to 86888511 468 CpG island CpG island 4927
Gm26698 12 86891404 to 86892567 1163 - lincRNA gene predicted gene, 26698
Tssr114482 12 86891607 to 86891624 17 + TSS region transcription start site region 114482
Cpgi4928 12 86891703 to 86892292 589 CpG island CpG island 4928
Tssr117140 12 86892540 to 86892569 29 - TSS region transcription start site region 117140
Tssr114483 12 86894565 to 86894571 6 + TSS region transcription start site region 114483
Tssr114484 12 86895256 to 86895272 16 + TSS region transcription start site region 114484
Tssr114485 12 86895295 to 86895315 20 + TSS region transcription start site region 114485
Tssr114486 12 86895318 to 86895339 21 + TSS region transcription start site region 114486
Tssr117141 12 86896890 to 86896901 11 - TSS region transcription start site region 117141
Tssr117142 12 86897017 to 86897028 11 - TSS region transcription start site region 117142
Tssr114487 12 86902580 to 86902593 13 + TSS region transcription start site region 114487
Tssr114488 12 86902699 to 86902711 12 + TSS region transcription start site region 114488
Gm32934 12 86940993 to 86947056 6063 - lncRNA gene predicted gene, 32934
Cpgi4929 12 86946398 to 86948097 1699 CpG island CpG island 4929
Tssr114489 12 86946521 to 86946532 11 + TSS region transcription start site region 114489
Tssr114490 12 86947031 to 86947055 24 + TSS region transcription start site region 114490
Cipc 12 86947043 to 86965362 18319 + protein coding gene CLOCK interacting protein, circadian
Tssr117143 12 86947328 to 86947335 7 - TSS region transcription start site region 117143
Tssr114491 12 86947369 to 86947430 61 + TSS region transcription start site region 114491
Tssr114492 12 86947431 to 86947481 50 + TSS region transcription start site region 114492
Tssr114493 12 86948880 to 86948883 3 + TSS region transcription start site region 114493
Tssr117144 12 86949569 to 86949583 14 - TSS region transcription start site region 117144
Tssr114494 12 86949722 to 86949742 20 + TSS region transcription start site region 114494
Tssr117145 12 86950451 to 86950456 5 - TSS region transcription start site region 117145
Tssr117146 12 86950537 to 86950566 29 - TSS region transcription start site region 117146
Tssr114495 12 86952500 to 86952509 9 + TSS region transcription start site region 114495
Tssr114496 12 86952593 to 86952614 21 + TSS region transcription start site region 114496
Tssr114497 12 86952736 to 86952744 8 + TSS region transcription start site region 114497
Cpgi4930 12 86960321 to 86960565 244 CpG island CpG island 4930
Tssr114498 12 86960363 to 86960391 28 + TSS region transcription start site region 114498
Cpgi4931 12 86974484 to 86974941 457 CpG island CpG island 4931
Cpgi4932 12 86977766 to 86977962 196 CpG island CpG island 4932
Zdhhc22 12 86980763 to 86990430 9667 - protein coding gene zinc finger, DHHC-type containing 22
Tssr117147 12 86983088 to 86983108 20 - TSS region transcription start site region 117147
Cpgi4933 12 86983385 to 86983837 452 CpG island CpG island 4933
Cpgi4934 12 86989675 to 86990801 1126 CpG island CpG island 4934
Tssr117148 12 86990451 to 86990467 16 - TSS region transcription start site region 117148
Tssr117149 12 86990468 to 86990483 15 - TSS region transcription start site region 117149
Tssr117150 12 86990484 to 86990494 10 - TSS region transcription start site region 117150
Tssr117151 12 86990503 to 86990521 18 - TSS region transcription start site region 117151
Tssr117152 12 86990522 to 86990533 11 - TSS region transcription start site region 117152
Tssr117153 12 86990569 to 86990588 19 - TSS region transcription start site region 117153
Tssr117154 12 86990603 to 86990612 9 - TSS region transcription start site region 117154
Tssr3904 12 86990659 to 86990662 3 - TSS region transcription start site region 3904
Tssr114499 12 87021321 to 87021333 12 + TSS region transcription start site region 114499
Tmem63c 12 87021340 to 87090043 68703 + protein coding gene transmembrane protein 63c
Tssr114500 12 87021366 to 87021372 6 + TSS region transcription start site region 114500
Tssr114501 12 87021375 to 87021382 7 + TSS region transcription start site region 114501
Tssr114502 12 87026286 to 87026297 11 + TSS region transcription start site region 114502
Cpgi4935 12 87026301 to 87026937 636 CpG island CpG island 4935
Tssr114503 12 87026318 to 87026337 19 + TSS region transcription start site region 114503
Tssr114504 12 87026458 to 87026522 64 + TSS region transcription start site region 114504
Tssr114505 12 87026570 to 87026583 13 + TSS region transcription start site region 114505
Gm25847 12 87034766 to 87034861 95 + miRNA gene predicted gene, 25847
Tssr117155 12 87048744 to 87048746 2 - TSS region transcription start site region 117155
Gm15745 12 87067477 to 87067591 114 + pseudogene predicted gene 15745