Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:8564345-8784382

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc7a15 12 8528483 to 8599066 70583 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 15
Tssr112726 12 8572152 to 8572166 14 + TSS region transcription start site region 112726
Gm40267 12 8603640 to 8641352 37712 - lncRNA gene predicted gene, 40267
Tssr115717 12 8637026 to 8637039 13 - TSS region transcription start site region 115717
Tssr112727 12 8637264 to 8637303 39 + TSS region transcription start site region 112727
Tssr115718 12 8640670 to 8640682 12 - TSS region transcription start site region 115718
Cpgi4397 12 8640744 to 8641302 558 CpG island CpG island 4397
Tssr115719 12 8641008 to 8641039 31 - TSS region transcription start site region 115719
Cpgi4398 12 8673789 to 8675056 1267 CpG island CpG island 4398
Tssr115720 12 8674064 to 8674094 30 - TSS region transcription start site region 115720
Tssr112728 12 8674129 to 8674150 21 + TSS region transcription start site region 112728
Pum2 12 8674134 to 8752581 78447 + protein coding gene pumilio RNA-binding family member 2
Tssr112729 12 8674235 to 8674275 40 + TSS region transcription start site region 112729
Tssr112730 12 8674345 to 8674382 37 + TSS region transcription start site region 112730
Tssr112731 12 8674391 to 8674421 30 + TSS region transcription start site region 112731
Tssr112732 12 8674429 to 8674450 21 + TSS region transcription start site region 112732
Tssr115721 12 8674630 to 8674670 40 - TSS region transcription start site region 115721
Tssr112733 12 8674701 to 8674746 45 + TSS region transcription start site region 112733
Tssr115722 12 8674832 to 8674846 14 - TSS region transcription start site region 115722
Tssr112734 12 8700365 to 8700370 5 + TSS region transcription start site region 112734
Tssr112735 12 8712988 to 8712993 5 + TSS region transcription start site region 112735
Tssr112736 12 8739677 to 8739704 27 + TSS region transcription start site region 112736
Tssr112737 12 8750115 to 8750153 38 + TSS region transcription start site region 112737
Tssr115723 12 8762066 to 8762070 4 - TSS region transcription start site region 115723
Gm4755 12 8765788 to 8771253 5465 - bidirectional promoter lncRNA gene predicted gene 4755
Cpgi4399 12 8770893 to 8773183 2290 CpG island CpG island 4399
Tssr112738 12 8771040 to 8771062 22 + TSS region transcription start site region 112738
Tssr112739 12 8771317 to 8771328 11 + TSS region transcription start site region 112739
Tssr112740 12 8771345 to 8771361 16 + TSS region transcription start site region 112740
Tssr112741 12 8771378 to 8771394 16 + TSS region transcription start site region 112741
Sdc1 12 8771396 to 8793716 22320 + protein coding gene syndecan 1
Tssr112742 12 8771405 to 8771425 20 + TSS region transcription start site region 112742
Tssr3790 12 8771430 to 8771444 14 + TSS region transcription start site region 3790
Tssr112743 12 8771448 to 8771464 16 + TSS region transcription start site region 112743
Tssr112744 12 8774569 to 8774573 4 + TSS region transcription start site region 112744