Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:85636720-85759087

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jdp2 12 85599027 to 85639878 40851 + protein coding gene Jun dimerization protein 2
Tssr117096 12 85639021 to 85639046 25 - TSS region transcription start site region 117096
Tssr114424 12 85639541 to 85639560 19 + TSS region transcription start site region 114424
Gm33312 12 85662442 to 85662868 426 + pseudogene predicted gene, 33312
Tssr114425 12 85686648 to 85686702 54 + TSS region transcription start site region 114425
Tssr114426 12 85686713 to 85686728 15 + TSS region transcription start site region 114426
Batf 12 85686720 to 85709087 22367 + protein coding gene basic leucine zipper transcription factor, ATF-like
Cpgi4902 12 85705466 to 85705890 424 CpG island CpG island 4902
Tssr117097 12 85705612 to 85705618 6 - TSS region transcription start site region 117097
Tssr117098 12 85705635 to 85705674 39 - TSS region transcription start site region 117098
Tssr114427 12 85705980 to 85705983 3 + TSS region transcription start site region 114427
Tssr114428 12 85715256 to 85715258 2 + TSS region transcription start site region 114428
n-R5s64 12 85718477 to 85718595 118 - rRNA gene nuclear encoded rRNA 5S 64
Gm47285 12 85718503 to 85718563 60 - miRNA gene predicted gene, 47285
Gm47901 12 85728457 to 85728719 262 + pseudogene predicted gene, 47901
Cpgi4903 12 85745764 to 85747382 1618 CpG island CpG island 4903
Flvcr2 12 85746539 to 85813585 67046 + protein coding gene feline leukemia virus subgroup C cellular receptor 2
Tssr114429 12 85746540 to 85746551 11 + TSS region transcription start site region 114429
Tssr114430 12 85746552 to 85746572 20 + TSS region transcription start site region 114430
Tssr114431 12 85746574 to 85746604 30 + TSS region transcription start site region 114431
Tssr117099 12 85747669 to 85747678 9 - TSS region transcription start site region 117099
Tssr117100 12 85747700 to 85747709 9 - TSS region transcription start site region 117100
Gm40478 12 85753787 to 85759526 5739 - lncRNA gene predicted gene, 40478