Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:85621720-85774087

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jdp2 12 85599027 to 85639878 40851 + protein coding gene Jun dimerization protein 2
Tssr117096 12 85639021 to 85639046 25 - TSS region transcription start site region 117096
Tssr114424 12 85639541 to 85639560 19 + TSS region transcription start site region 114424
Gm33312 12 85662442 to 85662868 426 + pseudogene predicted gene, 33312
Tssr114425 12 85686648 to 85686702 54 + TSS region transcription start site region 114425
Tssr114426 12 85686713 to 85686728 15 + TSS region transcription start site region 114426
Batf 12 85686720 to 85709087 22367 + protein coding gene basic leucine zipper transcription factor, ATF-like
Cpgi4902 12 85705466 to 85705890 424 CpG island CpG island 4902
Tssr117097 12 85705612 to 85705618 6 - TSS region transcription start site region 117097
Tssr117098 12 85705635 to 85705674 39 - TSS region transcription start site region 117098
Tssr114427 12 85705980 to 85705983 3 + TSS region transcription start site region 114427
Tssr114428 12 85715256 to 85715258 2 + TSS region transcription start site region 114428
n-R5s64 12 85718477 to 85718595 118 - rRNA gene nuclear encoded rRNA 5S 64
Gm47285 12 85718503 to 85718563 60 - miRNA gene predicted gene, 47285
Gm47901 12 85728457 to 85728719 262 + pseudogene predicted gene, 47901
Cpgi4903 12 85745764 to 85747382 1618 CpG island CpG island 4903
Flvcr2 12 85746539 to 85813585 67046 + protein coding gene feline leukemia virus subgroup C cellular receptor 2
Tssr114429 12 85746540 to 85746551 11 + TSS region transcription start site region 114429
Tssr114430 12 85746552 to 85746572 20 + TSS region transcription start site region 114430
Tssr114431 12 85746574 to 85746604 30 + TSS region transcription start site region 114431
Tssr117099 12 85747669 to 85747678 9 - TSS region transcription start site region 117099
Tssr117100 12 85747700 to 85747709 9 - TSS region transcription start site region 117100
Gm40478 12 85753787 to 85759526 5739 - lncRNA gene predicted gene, 40478
Tssr117101 12 85759452 to 85759461 9 - TSS region transcription start site region 117101
Tssr114432 12 85759511 to 85759537 26 + TSS region transcription start site region 114432
D12Mit256.3 12 85765408 to 85765519 111 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 256.3
D12Mit256 12 85765494 to 85765612 118 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 256