Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:85478240-85718275

Filter by:
45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D12Mit95 12 85478050 to 85478282 232 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 95
Tssr117091 12 85485791 to 85485807 16 - TSS region transcription start site region 117091
Cpgi4899 12 85485815 to 85486474 659 CpG island CpG island 4899
Tssr117092 12 85485928 to 85485939 11 - TSS region transcription start site region 117092
Tssr117093 12 85485955 to 85485966 11 - TSS region transcription start site region 117093
Tssr117094 12 85485980 to 85485994 14 - TSS region transcription start site region 117094
Tssr114406 12 85486229 to 85486249 20 + TSS region transcription start site region 114406
Tssr114407 12 85486271 to 85486290 19 + TSS region transcription start site region 114407
Cpgi4900 12 85486823 to 85487129 306 CpG island CpG island 4900
Tssr3900 12 85487841 to 85487853 12 - TSS region transcription start site region 3900
Tssr114408 12 85524653 to 85524664 11 + TSS region transcription start site region 114408
Tssr114409 12 85524669 to 85524683 14 + TSS region transcription start site region 114409
Tssr114410 12 85524689 to 85524713 24 + TSS region transcription start site region 114410
Tssr114411 12 85524715 to 85524742 27 + TSS region transcription start site region 114411
Tssr114412 12 85524831 to 85524841 10 + TSS region transcription start site region 114412
Gm32296 12 85529551 to 85541913 12362 + lincRNA gene predicted gene, 32296
D12Mit161 12 85561012 to 85561109 97 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 161
Gm32348 12 85569331 to 85585379 16048 + lncRNA gene predicted gene, 32348
D12Mit204 12 85580104 to 85580269 165 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 204
Gm47863 12 85597019 to 85599191 2172 - bidirectional promoter lncRNA gene predicted gene, 47863
Tssr114413 12 85598240 to 85598275 35 + TSS region transcription start site region 114413
Tssr114414 12 85598287 to 85598308 21 + TSS region transcription start site region 114414
Tssr114415 12 85598402 to 85598438 36 + TSS region transcription start site region 114415
Cpgi4901 12 85598530 to 85600335 1805 CpG island CpG island 4901
Tssr114416 12 85598600 to 85598607 7 + TSS region transcription start site region 114416
Tssr114417 12 85598707 to 85598735 28 + TSS region transcription start site region 114417
Jdp2 12 85599027 to 85639878 40851 + protein coding gene Jun dimerization protein 2
Tssr114418 12 85599047 to 85599090 43 + TSS region transcription start site region 114418
Tssr117095 12 85599181 to 85599243 62 - TSS region transcription start site region 117095
Tssr114419 12 85599350 to 85599362 12 + TSS region transcription start site region 114419
Tssr114420 12 85599388 to 85599407 19 + TSS region transcription start site region 114420
Tssr114421 12 85608292 to 85608304 12 + TSS region transcription start site region 114421
Tssr114422 12 85608322 to 85608340 18 + TSS region transcription start site region 114422
Tssr114423 12 85614387 to 85614390 3 + TSS region transcription start site region 114423
Tssr117096 12 85639021 to 85639046 25 - TSS region transcription start site region 117096
Tssr114424 12 85639541 to 85639560 19 + TSS region transcription start site region 114424
Gm33312 12 85662442 to 85662868 426 + pseudogene predicted gene, 33312
Tssr114425 12 85686648 to 85686702 54 + TSS region transcription start site region 114425
Tssr114426 12 85686713 to 85686728 15 + TSS region transcription start site region 114426
Batf 12 85686720 to 85709087 22367 + protein coding gene basic leucine zipper transcription factor, ATF-like
Cpgi4902 12 85705466 to 85705890 424 CpG island CpG island 4902
Tssr117097 12 85705612 to 85705618 6 - TSS region transcription start site region 117097
Tssr117098 12 85705635 to 85705674 39 - TSS region transcription start site region 117098
Tssr114427 12 85705980 to 85705983 3 + TSS region transcription start site region 114427
Tssr114428 12 85715256 to 85715258 2 + TSS region transcription start site region 114428