Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:84870814-85070884

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ltbp2 12 84783212 to 84876532 93320 - protein coding gene latent transforming growth factor beta binding protein 2
Cpgi4883 12 84875526 to 84877058 1532 CpG island CpG island 4883
D030025P21Rik 12 84875802 to 84879755 3953 + antisense lncRNA gene RIKEN cDNA D030025P21 gene
Tssr117040 12 84876161 to 84876175 14 - TSS region transcription start site region 117040
Tssr117041 12 84876436 to 84876445 9 - TSS region transcription start site region 117041
Tssr117042 12 84876446 to 84876467 21 - TSS region transcription start site region 117042
Tssr117043 12 84876470 to 84876474 4 - TSS region transcription start site region 117043
Tssr117044 12 84876483 to 84876497 14 - TSS region transcription start site region 117044
Tssr117045 12 84881442 to 84881445 3 - TSS region transcription start site region 117045
Gm48709 12 84881824 to 84889276 7452 + lincRNA gene predicted gene, 48709
Arel1 12 84918148 to 84970886 52738 - protein coding gene apoptosis resistant E3 ubiquitin protein ligase 1
Gm17139 12 84918148 to 84919238 1090 + antisense lncRNA gene predicted gene 17139
Tssr114366 12 84922321 to 84922338 17 + TSS region transcription start site region 114366
Gm17193 12 84922542 to 84923512 970 - sense intronic lncRNA gene predicted gene 17193
Tssr117046 12 84946921 to 84946923 2 - TSS region transcription start site region 117046
Tssr117047 12 84951141 to 84951146 5 - TSS region transcription start site region 117047
Tssr117048 12 84951293 to 84951296 3 - TSS region transcription start site region 117048
Tssr117049 12 84959558 to 84959561 3 - TSS region transcription start site region 117049
Cpgi4884 12 84970265 to 84971062 797 CpG island CpG island 4884
Tssr117050 12 84970814 to 84970884 70 - TSS region transcription start site region 117050
Tssr114367 12 84970904 to 84970950 46 + TSS region transcription start site region 114367
Fcf1 12 84970930 to 84983303 12373 + protein coding gene FCF1 rRNA processing protein
Cpgi4885 12 84996150 to 84997098 948 CpG island CpG island 4885
Tssr114368 12 84996309 to 84996419 110 + TSS region transcription start site region 114368
Ylpm1 12 84996321 to 85070515 74194 + protein coding gene YLP motif containing 1
Tssr114369 12 84996436 to 84996441 5 + TSS region transcription start site region 114369
Tssr114370 12 84996469 to 84996480 11 + TSS region transcription start site region 114370
Tssr114371 12 84996487 to 84996496 9 + TSS region transcription start site region 114371
Tssr114372 12 84997015 to 84997026 11 + TSS region transcription start site region 114372
Tssr114373 12 85013021 to 85013061 40 + TSS region transcription start site region 114373
Tssr114374 12 85029953 to 85029956 3 + TSS region transcription start site region 114374