Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:84570055-84730262

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vsx2 12 84569828 to 84595457 25629 + protein coding gene visual system homeobox 2
Cpgi4872 12 84569906 to 84570490 584 CpG island CpG island 4872
Cpgi4873 12 84570681 to 84572183 1502 CpG island CpG island 4873
Tssr114351 12 84571502 to 84571545 43 + TSS region transcription start site region 114351
Tssr117016 12 84583145 to 84583153 8 - TSS region transcription start site region 117016
Cpgi4874 12 84589893 to 84590464 571 CpG island CpG island 4874
Abcd4 12 84602531 to 84617483 14952 - protein coding gene ATP-binding cassette, sub-family D (ALD), member 4
Cpgi4875 12 84613825 to 84614223 398 CpG island CpG island 4875
Cpgi4876 12 84617105 to 84617583 478 CpG island CpG island 4876
Tssr117017 12 84617326 to 84617419 93 - TSS region transcription start site region 117017
Tssr114352 12 84640930 to 84640942 12 + TSS region transcription start site region 114352
Tssr114353 12 84640947 to 84640995 48 + TSS region transcription start site region 114353
Vrtn 12 84641019 to 84651455 10436 + protein coding gene vertebrae development associated
Tssr114354 12 84641394 to 84641409 15 + TSS region transcription start site region 114354
Cpgi4877 12 84648418 to 84648623 205 CpG island CpG island 4877
Cpgi4878 12 84649091 to 84649457 366 CpG island CpG island 4878
Cpgi4879 12 84650055 to 84650262 207 CpG island CpG island 4879
Syndig1l 12 84677277 to 84698831 21554 - protein coding gene synapse differentiation inducing 1 like
Gm48573 12 84677300 to 84677604 304 + antisense lncRNA gene predicted gene, 48573
Cpgi4880 12 84698043 to 84699118 1075 CpG island CpG island 4880
Tssr117018 12 84698769 to 84698819 50 - TSS region transcription start site region 117018