MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:83984481-84034503

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Heatr4	12	83954499 to 83984852	30353	-	protein coding gene	HEAT repeat containing 4
Tssr116977	12	83984821 to 83984843	22	-	TSS region	transcription start site region 116977
Tssr116978	12	83984849 to 83984856	7	-	TSS region	transcription start site region 116978
Tssr114300	12	83987653 to 83987676	23	+	TSS region	transcription start site region 114300
Cpgi4852	12	83987679 to 83988719	1040		CpG island	CpG island 4852
Tssr114301	12	83987684 to 83987725	41	+	TSS region	transcription start site region 114301
Tssr114302	12	83987730 to 83987753	23	+	TSS region	transcription start site region 114302
Tssr114303	12	83987800 to 83987827	27	+	TSS region	transcription start site region 114303
Tssr114304	12	83987854 to 83987898	44	+	TSS region	transcription start site region 114304
Acot2	12	83987861 to 83993873	6012	+	protein coding gene	acyl-CoA thioesterase 2
Tssr114305	12	83987907 to 83987918	11	+	TSS region	transcription start site region 114305
Tssr114306	12	83993257 to 83993261	4	+	TSS region	transcription start site region 114306
Tssr114307	12	83993400 to 83993413	13	+	TSS region	transcription start site region 114307
Cpgi4853	12	84009265 to 84010179	914		CpG island	CpG island 4853
Tssr114308	12	84009481 to 84009503	22	+	TSS region	transcription start site region 114308
Acot1	12	84009502 to 84017670	8168	+	protein coding gene	acyl-CoA thioesterase 1
Gm40474	12	84018327 to 84029448	11121	-	lncRNA gene	predicted gene, 40474
Gm47943	12	84023808 to 84024087	279	+	pseudogene	predicted gene, 47943