Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 12:83850634-84050705

Filter by:
46 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Numb 12 83794034 to 83921934 127900 - protein coding gene NUMB endocytic adaptor protein
Tssr116972 12 83864307 to 83864309 2 - TSS region transcription start site region 116972
Gm3791 12 83875115 to 83875882 767 - pseudogene predicted gene 3791
D12Mit159 12 83880713 to 83880823 110 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 159
2010015B12Rik 12 83897468 to 83898220 752 - lncRNA gene RIKEN cDNA 2010015B12 gene
B230327D02Rik 12 83911351 to 83915276 3925 - lncRNA gene RIKEN cDNA B230327D02 gene
Cpgi4850 12 83921002 to 83922358 1356 CpG island CpG island 4850
Tssr116973 12 83921809 to 83921898 89 - TSS region transcription start site region 116973
Gm31386 12 83921888 to 83933096 11208 + lncRNA gene predicted gene, 31386
Tssr116974 12 83921899 to 83921912 13 - TSS region transcription start site region 116974
Gm26571 12 83945209 to 83951355 6146 - lncRNA gene predicted gene, 26571
Tssr114294 12 83947521 to 83947552 31 + TSS region transcription start site region 114294
Tssr114295 12 83950019 to 83950032 13 + TSS region transcription start site region 114295
Tssr114296 12 83950054 to 83950071 17 + TSS region transcription start site region 114296
Tssr114297 12 83950083 to 83950090 7 + TSS region transcription start site region 114297
Cpgi4851 12 83950340 to 83952148 1808 CpG island CpG island 4851
Riox1 12 83950608 to 83952951 2343 + protein coding gene ribosomal oxygenase 1
Tssr114298 12 83950634 to 83950705 71 + TSS region transcription start site region 114298
Tssr114299 12 83950813 to 83950844 31 + TSS region transcription start site region 114299
Tssr116975 12 83951553 to 83951568 15 - TSS region transcription start site region 116975
Heatr4 12 83954499 to 83984852 30353 - protein coding gene HEAT repeat containing 4
Tssr116976 12 83956062 to 83956068 6 - TSS region transcription start site region 116976
Tssr116977 12 83984821 to 83984843 22 - TSS region transcription start site region 116977
Tssr116978 12 83984849 to 83984856 7 - TSS region transcription start site region 116978
Tssr114300 12 83987653 to 83987676 23 + TSS region transcription start site region 114300
Cpgi4852 12 83987679 to 83988719 1040 CpG island CpG island 4852
Tssr114301 12 83987684 to 83987725 41 + TSS region transcription start site region 114301
Tssr114302 12 83987730 to 83987753 23 + TSS region transcription start site region 114302
Tssr114303 12 83987800 to 83987827 27 + TSS region transcription start site region 114303
Tssr114304 12 83987854 to 83987898 44 + TSS region transcription start site region 114304
Acot2 12 83987861 to 83993873 6012 + protein coding gene acyl-CoA thioesterase 2
Tssr114305 12 83987907 to 83987918 11 + TSS region transcription start site region 114305
Tssr114306 12 83993257 to 83993261 4 + TSS region transcription start site region 114306
Tssr114307 12 83993400 to 83993413 13 + TSS region transcription start site region 114307
Cpgi4853 12 84009265 to 84010179 914 CpG island CpG island 4853
Tssr114308 12 84009481 to 84009503 22 + TSS region transcription start site region 114308
Acot1 12 84009502 to 84017670 8168 + protein coding gene acyl-CoA thioesterase 1
Gm40474 12 84018327 to 84053777 35450 - lncRNA gene predicted gene, 40474
Gm47943 12 84023808 to 84024087 279 + pseudogene predicted gene, 47943
Acot4 12 84037254 to 84044723 7469 + protein coding gene acyl-CoA thioesterase 4
Cpgi4854 12 84038214 to 84039092 878 CpG island CpG island 4854
Tssr114309 12 84038363 to 84038379 16 + TSS region transcription start site region 114309
Tssr114310 12 84038388 to 84038435 47 + TSS region transcription start site region 114310
Gm49366 12 84038935 to 84058613 19678 + protein coding gene predicted gene, 49366
4732463B04Rik 12 84039469 to 84053807 14338 - lncRNA gene RIKEN cDNA 4732463B04 gene
Tssr114311 12 84042515 to 84042527 12 + TSS region transcription start site region 114311