Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 12:83775115-83975882

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28 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Papln 12 83763634 to 83792382 28748 + protein coding gene papilin, proteoglycan-like sulfated glycoprotein
Cpgi4849 12 83781879 to 83782058 179 CpG island CpG island 4849
Numb 12 83794034 to 83921934 127900 - protein coding gene NUMB endocytic adaptor protein
Tssr116970 12 83819943 to 83819946 3 - TSS region transcription start site region 116970
Gm46367 12 83823455 to 83842087 18632 + lncRNA gene predicted gene, 46367
Tssr116971 12 83827618 to 83827645 27 - TSS region transcription start site region 116971
Gm47748 12 83848050 to 83848391 341 + pseudogene predicted gene, 47748
Tssr116972 12 83864307 to 83864309 2 - TSS region transcription start site region 116972
Gm3791 12 83875115 to 83875882 767 - pseudogene predicted gene 3791
D12Mit159 12 83880713 to 83880823 110 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 159
2010015B12Rik 12 83897467 to 83898219 752 lncRNA gene RIKEN cDNA 2010015B12 gene
B230327D02Rik 12 83911350 to 83915275 3925 lncRNA gene RIKEN cDNA B230327D02 gene
Cpgi4850 12 83921002 to 83922358 1356 CpG island CpG island 4850
Tssr116973 12 83921809 to 83921898 89 - TSS region transcription start site region 116973
Gm31386 12 83921888 to 83933096 11208 + lncRNA gene predicted gene, 31386
Tssr116974 12 83921899 to 83921912 13 - TSS region transcription start site region 116974
Gm26571 12 83945209 to 83951355 6146 - lncRNA gene predicted gene, 26571
Tssr114294 12 83947521 to 83947552 31 + TSS region transcription start site region 114294
Tssr114295 12 83950019 to 83950032 13 + TSS region transcription start site region 114295
Tssr114296 12 83950054 to 83950071 17 + TSS region transcription start site region 114296
Tssr114297 12 83950083 to 83950090 7 + TSS region transcription start site region 114297
Cpgi4851 12 83950340 to 83952148 1808 CpG island CpG island 4851
Riox1 12 83950608 to 83952951 2343 + protein coding gene ribosomal oxygenase 1
Tssr114298 12 83950634 to 83950705 71 + TSS region transcription start site region 114298
Tssr114299 12 83950813 to 83950844 31 + TSS region transcription start site region 114299
Tssr116975 12 83951553 to 83951568 15 - TSS region transcription start site region 116975
Heatr4 12 83954499 to 83984852 30353 - protein coding gene HEAT repeat containing 4
Tssr116976 12 83956062 to 83956068 6 - TSS region transcription start site region 116976