Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:83683050-84013391

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbm25 12 83632230 to 83683127 50897 + protein coding gene RNA binding motif protein 25
Cpgi4846 12 83687842 to 83688904 1062 CpG island CpG island 4846
Tssr114289 12 83688123 to 83688249 126 + TSS region transcription start site region 114289
Psen1 12 83688152 to 83735199 47047 + protein coding gene presenilin 1
Tssr114290 12 83688251 to 83688268 17 + TSS region transcription start site region 114290
Gm47666 12 83730062 to 83731457 1395 - antisense lncRNA gene predicted gene, 47666
Tssr116969 12 83731447 to 83731473 26 - TSS region transcription start site region 116969
Tssr114291 12 83731570 to 83731591 21 + TSS region transcription start site region 114291
Gm18592 12 83742762 to 83743037 275 + pseudogene predicted gene, 18592
Gm47681 12 83758944 to 83759346 402 + pseudogene predicted gene, 47681
Tssr114292 12 83763628 to 83763648 20 + TSS region transcription start site region 114292
Papln 12 83763634 to 83792382 28748 + protein coding gene papilin, proteoglycan-like sulfated glycoprotein
Cpgi4847 12 83763634 to 83764209 575 CpG island CpG island 4847
Tssr114293 12 83763656 to 83763671 15 + TSS region transcription start site region 114293
Cpgi4848 12 83771741 to 83772265 524 CpG island CpG island 4848
Cpgi4849 12 83781879 to 83782058 179 CpG island CpG island 4849
Numb 12 83794034 to 83921934 127900 - protein coding gene NUMB endocytic adaptor protein
Gm46367 12 83819656 to 83831936 12280 + lncRNA gene predicted gene, 46367
Tssr116970 12 83819943 to 83819946 3 - TSS region transcription start site region 116970
Tssr116971 12 83827618 to 83827645 27 - TSS region transcription start site region 116971
Gm47748 12 83848050 to 83848391 341 + pseudogene predicted gene, 47748
Tssr116972 12 83864307 to 83864309 2 - TSS region transcription start site region 116972
Gm3791 12 83875115 to 83875882 767 - pseudogene predicted gene 3791
D12Mit159 12 83880713 to 83880823 110 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 159
2010015B12Rik 12 83897467 to 83898219 752 unclassified gene RIKEN cDNA 2010015B12 gene
B230327D02Rik 12 83911350 to 83915275 3925 unclassified gene RIKEN cDNA B230327D02 gene
Cpgi4850 12 83921002 to 83922358 1356 CpG island CpG island 4850
Tssr116973 12 83921809 to 83921898 89 - TSS region transcription start site region 116973
Tssr116974 12 83921899 to 83921912 13 - TSS region transcription start site region 116974
Gm31386 12 83921999 to 83933096 11097 + lncRNA gene predicted gene, 31386
Gm26571 12 83945209 to 83951355 6146 - antisense lncRNA gene predicted gene, 26571
Tssr114294 12 83947521 to 83947552 31 + TSS region transcription start site region 114294
Tssr114295 12 83950019 to 83950032 13 + TSS region transcription start site region 114295
Tssr114296 12 83950054 to 83950071 17 + TSS region transcription start site region 114296
Tssr114297 12 83950083 to 83950090 7 + TSS region transcription start site region 114297
Cpgi4851 12 83950340 to 83952148 1808 CpG island CpG island 4851
Riox1 12 83950608 to 83952951 2343 + protein coding gene ribosomal oxygenase 1
Tssr114298 12 83950634 to 83950705 71 + TSS region transcription start site region 114298
Tssr114299 12 83950813 to 83950844 31 + TSS region transcription start site region 114299
Tssr116975 12 83951553 to 83951568 15 - TSS region transcription start site region 116975
Heatr4 12 83954499 to 83984852 30353 - protein coding gene HEAT repeat containing 4
Tssr116976 12 83956062 to 83956068 6 - TSS region transcription start site region 116976
Tssr116977 12 83984821 to 83984843 22 - TSS region transcription start site region 116977
Tssr116978 12 83984849 to 83984856 7 - TSS region transcription start site region 116978
Tssr114300 12 83987653 to 83987676 23 + TSS region transcription start site region 114300
Cpgi4852 12 83987679 to 83988719 1040 CpG island CpG island 4852
Tssr114301 12 83987684 to 83987725 41 + TSS region transcription start site region 114301
Tssr114302 12 83987730 to 83987753 23 + TSS region transcription start site region 114302
Tssr114303 12 83987800 to 83987827 27 + TSS region transcription start site region 114303
Tssr114304 12 83987854 to 83987898 44 + TSS region transcription start site region 114304
Acot2 12 83987861 to 83993873 6012 + protein coding gene acyl-CoA thioesterase 2
Tssr114305 12 83987907 to 83987918 11 + TSS region transcription start site region 114305
Tssr114306 12 83993257 to 83993261 4 + TSS region transcription start site region 114306
Tssr114307 12 83993400 to 83993413 13 + TSS region transcription start site region 114307
Cpgi4853 12 84009265 to 84010179 914 CpG island CpG island 4853
Tssr114308 12 84009481 to 84009503 22 + TSS region transcription start site region 114308
Acot1 12 84009502 to 84017670 8168 + protein coding gene acyl-CoA thioesterase 1