Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:82277520-83594155

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eccp 12 35901444 to 82619165 46717721 heritable phenotypic marker eccentric pupil
Ahrq1 12 54649125 to 82619165 27970040 QTL airway hyperresponsiveness QTL 1
Fbgl1 12 78993390 to 83115437 4122047 QTL fasting blood glucose 1
Sipa1l1 12 82169378 to 82451786 282408 + protein coding gene signal-induced proliferation-associated 1 like 1
Tssr3886 12 82307716 to 82307725 9 + TSS region transcription start site region 3886
Tssr114229 12 82339463 to 82339488 25 + TSS region transcription start site region 114229
Tssr114230 12 82339696 to 82339703 7 + TSS region transcription start site region 114230
Tssr114231 12 82339707 to 82339716 9 + TSS region transcription start site region 114231
Tssr114232 12 82339724 to 82339750 26 + TSS region transcription start site region 114232
Tssr114233 12 82339760 to 82339776 16 + TSS region transcription start site region 114233
Tssr114234 12 82339781 to 82339790 9 + TSS region transcription start site region 114234
Tssr114235 12 82373148 to 82373158 10 + TSS region transcription start site region 114235
Gm30916 12 82391698 to 82392453 755 + lncRNA gene predicted gene, 30916
Tssr114236 12 82397378 to 82397389 11 + TSS region transcription start site region 114236
Tssr114237 12 82420455 to 82420469 14 + TSS region transcription start site region 114237
Tssr114238 12 82423030 to 82423039 9 + TSS region transcription start site region 114238
Tssr114239 12 82450591 to 82450603 12 + TSS region transcription start site region 114239
Tssr114240 12 82451152 to 82451172 20 + TSS region transcription start site region 114240
Tssr114241 12 82451190 to 82451202 12 + TSS region transcription start site region 114241
Tssr114242 12 82451205 to 82451225 20 + TSS region transcription start site region 114242
Tssr114243 12 82451258 to 82451284 26 + TSS region transcription start site region 114243
Gm31064 12 82474044 to 82478775 4731 - lncRNA gene predicted gene, 31064
Gm30966 12 82476867 to 82489024 12157 + lncRNA gene predicted gene, 30966
Tssr116944 12 82478460 to 82478471 11 - TSS region transcription start site region 116944
Gm5435 12 82495420 to 82496537 1117 - pseudogene predicted gene 5435
Tssr114244 12 82543597 to 82543606 9 + TSS region transcription start site region 114244
Gm8358 12 82543636 to 82544190 554 + pseudogene predicted gene 8358
n-R5s63 12 82585358 to 82585460 102 - rRNA gene nuclear encoded rRNA 5S 63
Cpgi4838 12 82616462 to 82617837 1375 CpG island CpG island 4838
Tssr114245 12 82616512 to 82616542 30 + TSS region transcription start site region 114245
Tssr114246 12 82616577 to 82616581 4 + TSS region transcription start site region 114246
Rgs6 12 82616665 to 83162061 545396 + protein coding gene regulator of G-protein signaling 6
Tssr114247 12 82616885 to 82616971 86 + TSS region transcription start site region 114247
Tssr114248 12 82617011 to 82617026 15 + TSS region transcription start site region 114248
Tssr114249 12 82617102 to 82617116 14 + TSS region transcription start site region 114249
D12Mit158 12 82619016 to 82619165 149 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 158
Tssr114250 12 82707054 to 82707065 11 + TSS region transcription start site region 114250
Tssr114251 12 82707536 to 82707581 45 + TSS region transcription start site region 114251
Tssr114252 12 82770727 to 82770733 6 + TSS region transcription start site region 114252
Gm22149 12 82772321 to 82772456 135 - snoRNA gene predicted gene, 22149
1700085C21Rik 12 82932520 to 82939155 6635 - antisense lncRNA gene RIKEN cDNA 1700085C21 gene
4930423C22Rik 12 82959847 to 82961157 1310 - unclassified gene RIKEN cDNA 4930423C22 gene
Gm31308 12 82999277 to 83016274 16997 - lncRNA gene predicted gene, 31308
Tssr116945 12 83004496 to 83004517 21 - TSS region transcription start site region 116945
Tssr114253 12 83028217 to 83028221 4 + TSS region transcription start site region 114253
Gm29530 12 83063392 to 83098874 35482 - antisense lncRNA gene predicted gene 29530
Gm31187 12 83077693 to 83083153 5460 - lncRNA gene predicted gene, 31187
Cpgi4839 12 83084114 to 83084381 267 CpG island CpG island 4839
D12Mit176 12 83091166 to 83091307 141 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 176
D12Mit227 12 83115316 to 83115437 121 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 227
4933436F18Rik 12 83121315 to 83122116 801 - unclassified gene RIKEN cDNA 4933436F18 gene
Tssr116946 12 83122113 to 83122123 10 - TSS region transcription start site region 116946
1700030I03Rik 12 83122214 to 83123155 941 + lncRNA gene RIKEN cDNA 1700030I03 gene
Dpf3 12 83213745 to 83487716 273971 - protein coding gene D4, zinc and double PHD fingers, family 3
Tssr3887 12 83359251 to 83359254 3 - TSS region transcription start site region 3887
Tssr114254 12 83424635 to 83424673 38 + TSS region transcription start site region 114254
Tssr116947 12 83424889 to 83424903 14 - TSS region transcription start site region 116947
Tssr116948 12 83424905 to 83424912 7 - TSS region transcription start site region 116948
Tssr116949 12 83424944 to 83424952 8 - TSS region transcription start site region 116949
Tssr116950 12 83439910 to 83439934 24 - TSS region transcription start site region 116950
Tssr116951 12 83455939 to 83455942 3 - TSS region transcription start site region 116951
Cpgi4840 12 83485598 to 83487977 2379 CpG island CpG island 4840
Tssr116952 12 83487713 to 83487729 16 - TSS region transcription start site region 116952
Tssr116953 12 83487731 to 83487740 9 - TSS region transcription start site region 116953
Cpgi4841 12 83488313 to 83488557 244 CpG island CpG island 4841
Gm47184 12 83505082 to 83505579 497 + pseudogene predicted gene, 47184
Cpgi4842 12 83520249 to 83520869 620 CpG island CpG island 4842
Tssr116954 12 83520289 to 83520332 43 - TSS region transcription start site region 116954
Tssr114255 12 83520436 to 83520447 11 + TSS region transcription start site region 114255
Dcaf4 12 83520466 to 83541920 21454 + protein coding gene DDB1 and CUL4 associated factor 4
Tssr114256 12 83520467 to 83520484 17 + TSS region transcription start site region 114256
Tssr114257 12 83520504 to 83520517 13 + TSS region transcription start site region 114257
Tssr114258 12 83520528 to 83520598 70 + TSS region transcription start site region 114258
Tssr114259 12 83526043 to 83526069 26 + TSS region transcription start site region 114259
Zfyve1 12 83546558 to 83597222 50664 - protein coding gene zinc finger, FYVE domain containing 1
Tssr116955 12 83562427 to 83562440 13 - TSS region transcription start site region 116955
Tssr116956 12 83562443 to 83562462 19 - TSS region transcription start site region 116956
Tssr116957 12 83562465 to 83562466 1 - TSS region transcription start site region 116957
Tssr116958 12 83570926 to 83570929 3 - TSS region transcription start site region 116958
Tssr116959 12 83590907 to 83590912 5 - TSS region transcription start site region 116959