Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:81953381-82193395

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcnx 12 81860028 to 82000924 140896 + protein coding gene pecanex homolog
Tssr114209 12 81959121 to 81959133 12 + TSS region transcription start site region 114209
Tssr114210 12 81959186 to 81959194 8 + TSS region transcription start site region 114210
Tssr114211 12 81971168 to 81971199 31 + TSS region transcription start site region 114211
Tssr114212 12 81971202 to 81971221 19 + TSS region transcription start site region 114212
Tssr114213 12 81971222 to 81971245 23 + TSS region transcription start site region 114213
Cpgi4835 12 81971381 to 81971583 202 CpG island CpG island 4835
Gm49749 12 82000268 to 82000919 651 + lincRNA gene predicted gene, 49749
Gm30799 12 82069528 to 82123070 53542 + lncRNA gene predicted gene, 30799
Cpgi4836 12 82072746 to 82073037 291 CpG island CpG island 4836
Tssr3883 12 82073381 to 82073395 14 + TSS region transcription start site region 3883
Tssr116941 12 82122800 to 82122804 4 - TSS region transcription start site region 116941
n-R5s62 12 82150468 to 82150563 95 + rRNA gene nuclear encoded rRNA 5S 62
Gm48242 12 82168850 to 82169105 255 - lincRNA gene predicted gene, 48242
Cpgi4837 12 82168969 to 82170752 1783 CpG island CpG island 4837
Sipa1l1 12 82169378 to 82451786 282408 + protein coding gene signal-induced proliferation-associated 1 like 1
Tssr114214 12 82169419 to 82169443 24 + TSS region transcription start site region 114214
Tssr114215 12 82169459 to 82169484 25 + TSS region transcription start site region 114215
Tssr114216 12 82170146 to 82170173 27 + TSS region transcription start site region 114216
Tssr114217 12 82170247 to 82170304 57 + TSS region transcription start site region 114217
Tssr114218 12 82170313 to 82170341 28 + TSS region transcription start site region 114218
Tssr116942 12 82170578 to 82170611 33 - TSS region transcription start site region 116942
Ebao2 12 108679049 to 82166529 -26512520 QTL epidermolysis bullosa acquisita onset 2