Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:81852800-82392804

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47080 12 81827799 to 81853031 25232 + lincRNA gene predicted gene, 47080
Cpgi4834 12 81859660 to 81861268 1608 CpG island CpG island 4834
Tssr114204 12 81859881 to 81859924 43 + TSS region transcription start site region 114204
Tssr114205 12 81859964 to 81860036 72 + TSS region transcription start site region 114205
Pcnx 12 81860028 to 82000924 140896 + protein coding gene pecanex homolog
Tssr114206 12 81860073 to 81860121 48 + TSS region transcription start site region 114206
Tssr114207 12 81860190 to 81860236 46 + TSS region transcription start site region 114207
Tssr114208 12 81928156 to 81928172 16 + TSS region transcription start site region 114208
Tssr114209 12 81959121 to 81959133 12 + TSS region transcription start site region 114209
Tssr114210 12 81959186 to 81959194 8 + TSS region transcription start site region 114210
Tssr114211 12 81971168 to 81971199 31 + TSS region transcription start site region 114211
Tssr114212 12 81971202 to 81971221 19 + TSS region transcription start site region 114212
Tssr114213 12 81971222 to 81971245 23 + TSS region transcription start site region 114213
Cpgi4835 12 81971381 to 81971583 202 CpG island CpG island 4835
Gm49749 12 82000268 to 82000919 651 + lincRNA gene predicted gene, 49749
Gm30799 12 82069528 to 82123070 53542 + lncRNA gene predicted gene, 30799
Cpgi4836 12 82072746 to 82073037 291 CpG island CpG island 4836
Tssr3883 12 82073381 to 82073395 14 + TSS region transcription start site region 3883
Tssr116941 12 82122800 to 82122804 4 - TSS region transcription start site region 116941
n-R5s62 12 82150468 to 82150563 95 + rRNA gene nuclear encoded rRNA 5S 62
Gm48242 12 82168850 to 82169105 255 - lincRNA gene predicted gene, 48242
Cpgi4837 12 82168969 to 82170752 1783 CpG island CpG island 4837
Sipa1l1 12 82169378 to 82451786 282408 + protein coding gene signal-induced proliferation-associated 1 like 1
Tssr114214 12 82169419 to 82169443 24 + TSS region transcription start site region 114214
Tssr114215 12 82169459 to 82169484 25 + TSS region transcription start site region 114215
Tssr114216 12 82170146 to 82170173 27 + TSS region transcription start site region 114216
Tssr114217 12 82170247 to 82170304 57 + TSS region transcription start site region 114217
Tssr114218 12 82170313 to 82170341 28 + TSS region transcription start site region 114218
Tssr116942 12 82170578 to 82170611 33 - TSS region transcription start site region 116942
Tssr114219 12 82202945 to 82202949 4 + TSS region transcription start site region 114219
Tssr114220 12 82206129 to 82206133 4 + TSS region transcription start site region 114220
Tssr114221 12 82244642 to 82244673 31 + TSS region transcription start site region 114221
Tssr116943 12 82245398 to 82245408 10 - TSS region transcription start site region 116943
Tssr114222 12 82245518 to 82245527 9 + TSS region transcription start site region 114222
Tssr114223 12 82245685 to 82245701 16 + TSS region transcription start site region 114223
Tssr114224 12 82245730 to 82245745 15 + TSS region transcription start site region 114224
Tssr114225 12 82245806 to 82245815 9 + TSS region transcription start site region 114225
Tssr114226 12 82246657 to 82246669 12 + TSS region transcription start site region 114226
Tssr114227 12 82246770 to 82246781 11 + TSS region transcription start site region 114227
Tssr3884 12 82251459 to 82251474 15 - TSS region transcription start site region 3884
Tssr3885 12 82251584 to 82251586 2 + TSS region transcription start site region 3885
Tssr114228 12 82256576 to 82256585 9 + TSS region transcription start site region 114228
Tssr3886 12 82307716 to 82307725 9 + TSS region transcription start site region 3886
Tssr114229 12 82339463 to 82339488 25 + TSS region transcription start site region 114229
Tssr114230 12 82339696 to 82339703 7 + TSS region transcription start site region 114230
Tssr114231 12 82339707 to 82339716 9 + TSS region transcription start site region 114231
Tssr114232 12 82339724 to 82339750 26 + TSS region transcription start site region 114232
Tssr114233 12 82339760 to 82339776 16 + TSS region transcription start site region 114233
Tssr114234 12 82339781 to 82339790 9 + TSS region transcription start site region 114234
Tssr114235 12 82373148 to 82373158 10 + TSS region transcription start site region 114235
Gm30916 12 82391698 to 82392453 755 + lncRNA gene predicted gene, 30916
Ebao2 12 108679049 to 82166529 -26512520 QTL epidermolysis bullosa acquisita onset 2