MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:81694462-81834508

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm3529	12	81708814 to 81711786	2972	+	pseudogene	predicted gene 3529
Tssr114202	12	81709103 to 81709138	35	+	TSS region	transcription start site region 114202
Gm49654	12	81717830 to 81720052	2222	-	lincRNA gene	predicted gene, 49654
Map3k9	12	81721010 to 81781175	60165	-	protein coding gene	mitogen-activated protein kinase kinase kinase 9
Tssr3882	12	81764462 to 81764508	46	-	TSS region	transcription start site region 3882
Tssr116934	12	81765127 to 81765130	3	-	TSS region	transcription start site region 116934
Cpgi4832	12	81780251 to 81781746	1495		CpG island	CpG island 4832
Tssr114203	12	81780284 to 81780303	19	+	TSS region	transcription start site region 114203
Tssr116935	12	81781043 to 81781066	23	-	TSS region	transcription start site region 116935
Tssr116936	12	81781121 to 81781176	55	-	TSS region	transcription start site region 116936
4930423D22Rik	12	81781358 to 81783031	1673	+	bidirectional promoter lncRNA gene	RIKEN cDNA 4930423D22 gene
Gm46366	12	81781453 to 81791090	9637	-	lncRNA gene	predicted gene, 46366
Tssr116937	12	81790889 to 81790898	9	-	TSS region	transcription start site region 116937
Tssr116938	12	81790901 to 81790940	39	-	TSS region	transcription start site region 116938
Gm30706	12	81792430 to 81807348	14918	-	lncRNA gene	predicted gene, 30706
Tssr116939	12	81817259 to 81817280	21	-	TSS region	transcription start site region 116939
Tssr116940	12	81817281 to 81817287	6	-	TSS region	transcription start site region 116940
Gm47080	12	81827799 to 81853031	25232	+	lincRNA gene	predicted gene, 47080