Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:81637830-81800052

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttc9 12 81631249 to 81667557 36308 + protein coding gene tetratricopeptide repeat domain 9
Cdcs7 12 81642309 to 81642455 146 QTL cytokine deficiency colitis susceptibility 7
Cdcs8 12 81642309 to 81642455 146 QTL cytokine deficiency colitis susceptibility 8
D12Mit214 12 81642309 to 81642455 146 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 214
Tssr114200 12 81663339 to 81663348 9 + TSS region transcription start site region 114200
Tssr114201 12 81663358 to 81663378 20 + TSS region transcription start site region 114201
Tssr116933 12 81663993 to 81664006 13 - TSS region transcription start site region 116933
Gm3529 12 81708814 to 81711786 2972 + pseudogene predicted gene 3529
Tssr114202 12 81709103 to 81709138 35 + TSS region transcription start site region 114202
Gm49654 12 81717830 to 81720052 2222 - lincRNA gene predicted gene, 49654
Map3k9 12 81721010 to 81781175 60165 - protein coding gene mitogen-activated protein kinase kinase kinase 9
Tssr3882 12 81764462 to 81764508 46 - TSS region transcription start site region 3882
Tssr116934 12 81765127 to 81765130 3 - TSS region transcription start site region 116934
Cpgi4832 12 81780251 to 81781746 1495 CpG island CpG island 4832
Tssr114203 12 81780284 to 81780303 19 + TSS region transcription start site region 114203
Tssr116935 12 81781043 to 81781066 23 - TSS region transcription start site region 116935
Tssr116936 12 81781121 to 81781176 55 - TSS region transcription start site region 116936
4930423D22Rik 12 81781358 to 81783031 1673 + bidirectional promoter lncRNA gene RIKEN cDNA 4930423D22 gene
Gm46366 12 81781453 to 81791090 9637 - lncRNA gene predicted gene, 46366
Tssr116937 12 81790889 to 81790898 9 - TSS region transcription start site region 116937
Tssr116938 12 81790901 to 81790940 39 - TSS region transcription start site region 116938
Gm30706 12 81792430 to 81807348 14918 - lncRNA gene predicted gene, 30706