Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:81598358-81728378

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4831 12 81630591 to 81632107 1516 CpG island CpG island 4831
Tssr114197 12 81631046 to 81631121 75 + TSS region transcription start site region 114197
Tssr114198 12 81631228 to 81631312 84 + TSS region transcription start site region 114198
Ttc9 12 81631249 to 81667557 36308 + protein coding gene tetratricopeptide repeat domain 9
Tssr114199 12 81631380 to 81631394 14 + TSS region transcription start site region 114199
Cdcs7 12 81642309 to 81642455 146 QTL cytokine deficiency colitis susceptibility 7
Cdcs8 12 81642309 to 81642455 146 QTL cytokine deficiency colitis susceptibility 8
D12Mit214 12 81642309 to 81642455 146 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 214
Tssr114200 12 81663339 to 81663348 9 + TSS region transcription start site region 114200
Tssr114201 12 81663358 to 81663378 20 + TSS region transcription start site region 114201
Tssr116933 12 81663993 to 81664006 13 - TSS region transcription start site region 116933
Gm3529 12 81708814 to 81711786 2972 + pseudogene predicted gene 3529
Tssr114202 12 81709103 to 81709138 35 + TSS region transcription start site region 114202
Gm49654 12 81717830 to 81720052 2222 - lincRNA gene predicted gene, 49654
Map3k9 12 81721010 to 81781175 60165 - protein coding gene mitogen-activated protein kinase kinase kinase 9