Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:80647591-80769214

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc39a9 12 80644163 to 80683342 39179 + protein coding gene solute carrier family 39 (zinc transporter), member 9
Gm47874 12 80648637 to 80649211 574 - pseudogene predicted gene, 47874
Plekhd1os 12 80686370 to 80692466 6096 - antisense lncRNA gene pleckstrin homology domain containing, family D (with coiled-coil domains) member 1, opposite strand
Cpgi4818 12 80692127 to 80693297 1170 CpG island CpG island 4818
Plekhd1 12 80692591 to 80724214 31623 + protein coding gene pleckstrin homology domain containing, family D (with coiled-coil domains) member 1
Tssr114151 12 80692643 to 80692717 74 + TSS region transcription start site region 114151
Cpgi4819 12 80721321 to 80721600 279 CpG island CpG island 4819
Tssr114152 12 80721696 to 80721719 23 + TSS region transcription start site region 114152
Tssr114153 12 80721727 to 80721757 30 + TSS region transcription start site region 114153
Ccdc177 12 80755447 to 80760715 5268 - protein coding gene coiled-coil domain containing 177
Cpgi4820 12 80756999 to 80759918 2919 CpG island CpG island 4820
Gm26796 12 80758406 to 80762793 4387 + antisense lncRNA gene predicted gene, 26796
Cpgi4821 12 80760192 to 80760612 420 CpG island CpG island 4821
Tssr116892 12 80760532 to 80760546 14 - TSS region transcription start site region 116892
Tssr116893 12 80760682 to 80760730 48 - TSS region transcription start site region 116893