Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:8008433-8648824

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134 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Apob 12 7977648 to 8016835 39187 + protein coding gene apolipoprotein B
Tssr112647 12 8008582 to 8008593 11 + TSS region transcription start site region 112647
Tssr112648 12 8008594 to 8008615 21 + TSS region transcription start site region 112648
Tssr3782 12 8008696 to 8008712 16 + TSS region transcription start site region 3782
Tssr112649 12 8009086 to 8009097 11 + TSS region transcription start site region 112649
Tssr112650 12 8009145 to 8009177 32 + TSS region transcription start site region 112650
Tssr112651 12 8009216 to 8009229 13 + TSS region transcription start site region 112651
Tssr112652 12 8009240 to 8009259 19 + TSS region transcription start site region 112652
Tssr112653 12 8009267 to 8009278 11 + TSS region transcription start site region 112653
Tssr112654 12 8009283 to 8009292 9 + TSS region transcription start site region 112654
Tssr112655 12 8009301 to 8009315 14 + TSS region transcription start site region 112655
Tssr112656 12 8009323 to 8009335 12 + TSS region transcription start site region 112656
Tssr112657 12 8009338 to 8009349 11 + TSS region transcription start site region 112657
Tssr112658 12 8009371 to 8009382 11 + TSS region transcription start site region 112658
Tssr112659 12 8009424 to 8009461 37 + TSS region transcription start site region 112659
Tssr112660 12 8009576 to 8009585 9 + TSS region transcription start site region 112660
Tssr112661 12 8009807 to 8009820 13 + TSS region transcription start site region 112661
Tssr112662 12 8010051 to 8010061 10 + TSS region transcription start site region 112662
Tssr112663 12 8010286 to 8010302 16 + TSS region transcription start site region 112663
Tssr112664 12 8010311 to 8010326 15 + TSS region transcription start site region 112664
Tssr112665 12 8010476 to 8010481 5 + TSS region transcription start site region 112665
Tssr112666 12 8010485 to 8010501 16 + TSS region transcription start site region 112666
Tssr112667 12 8010532 to 8010550 18 + TSS region transcription start site region 112667
Tssr112668 12 8010670 to 8010686 16 + TSS region transcription start site region 112668
Tssr112669 12 8010755 to 8010773 18 + TSS region transcription start site region 112669
Tssr112670 12 8010808 to 8010829 21 + TSS region transcription start site region 112670
Tssr112671 12 8010923 to 8010932 9 + TSS region transcription start site region 112671
Tssr112672 12 8011502 to 8011514 12 + TSS region transcription start site region 112672
Tssr112673 12 8011545 to 8011582 37 + TSS region transcription start site region 112673
Tssr112674 12 8011646 to 8011657 11 + TSS region transcription start site region 112674
Tssr112675 12 8011673 to 8011689 16 + TSS region transcription start site region 112675
Tssr112676 12 8011776 to 8011785 9 + TSS region transcription start site region 112676
Tssr112677 12 8011926 to 8011937 11 + TSS region transcription start site region 112677
Tssr112678 12 8012050 to 8012059 9 + TSS region transcription start site region 112678
Tssr112679 12 8012075 to 8012085 10 + TSS region transcription start site region 112679
Tssr112680 12 8012094 to 8012101 7 + TSS region transcription start site region 112680
Tssr112681 12 8012141 to 8012151 10 + TSS region transcription start site region 112681
Tssr112682 12 8012154 to 8012166 12 + TSS region transcription start site region 112682
Tssr112683 12 8012191 to 8012200 9 + TSS region transcription start site region 112683
Tssr112684 12 8012235 to 8012244 9 + TSS region transcription start site region 112684
Tssr112685 12 8012283 to 8012307 24 + TSS region transcription start site region 112685
Tssr112686 12 8012331 to 8012338 7 + TSS region transcription start site region 112686
Tssr112687 12 8012411 to 8012419 8 + TSS region transcription start site region 112687
Tssr112688 12 8012512 to 8012522 10 + TSS region transcription start site region 112688
Tssr112689 12 8012554 to 8012562 8 + TSS region transcription start site region 112689
Tssr112690 12 8012579 to 8012588 9 + TSS region transcription start site region 112690
Tssr112691 12 8012630 to 8012644 14 + TSS region transcription start site region 112691
Tssr112692 12 8012666 to 8012677 11 + TSS region transcription start site region 112692
Tssr112693 12 8012685 to 8012696 11 + TSS region transcription start site region 112693
Tssr112694 12 8012823 to 8012832 9 + TSS region transcription start site region 112694
Tssr112695 12 8013042 to 8013049 7 + TSS region transcription start site region 112695
Tssr112696 12 8015037 to 8015050 13 + TSS region transcription start site region 112696
Tssr112697 12 8015320 to 8015334 14 + TSS region transcription start site region 112697
Tssr112698 12 8015367 to 8015386 19 + TSS region transcription start site region 112698
Tssr112699 12 8015468 to 8015496 28 + TSS region transcription start site region 112699
Tssr112700 12 8015500 to 8015513 13 + TSS region transcription start site region 112700
Tssr3783 12 8015647 to 8015656 9 + TSS region transcription start site region 3783
Tssr112701 12 8015691 to 8015703 12 + TSS region transcription start site region 112701
Tssr112702 12 8015814 to 8015826 12 + TSS region transcription start site region 112702
Tssr112703 12 8015955 to 8015970 15 + TSS region transcription start site region 112703
Tssr112704 12 8016805 to 8016811 6 + TSS region transcription start site region 112704
Gm33037 12 8042932 to 8208096 165164 - antisense lncRNA gene predicted gene, 33037
Cpgi4390 12 8207975 to 8208490 515 CpG island CpG island 4390
Ldah 12 8208107 to 8285759 77652 + protein coding gene lipid droplet associated hydrolase
Tssr112705 12 8208119 to 8208161 42 + TSS region transcription start site region 112705
Tssr112706 12 8208164 to 8208172 8 + TSS region transcription start site region 112706
Tssr112707 12 8216602 to 8216609 7 + TSS region transcription start site region 112707
Tssr112708 12 8216612 to 8216619 7 + TSS region transcription start site region 112708
Tssr112709 12 8216636 to 8216666 30 + TSS region transcription start site region 112709
Tssr112710 12 8216670 to 8216684 14 + TSS region transcription start site region 112710
Tssr112711 12 8220003 to 8220011 8 + TSS region transcription start site region 112711
Tssr112712 12 8220026 to 8220033 7 + TSS region transcription start site region 112712
Tssr112713 12 8287053 to 8287058 5 + TSS region transcription start site region 112713
Gm48898 12 8291024 to 8293694 2670 - lincRNA gene predicted gene, 48898
Cpgi4391 12 8297623 to 8299303 1680 CpG island CpG island 4391
Gdf7 12 8297918 to 8301954 4036 - protein coding gene growth differentiation factor 7
Cpgi4392 12 8299540 to 8299794 254 CpG island CpG island 4392
Cpgi4393 12 8301312 to 8302537 1225 CpG island CpG island 4393
Tssr115700 12 8301981 to 8301995 14 - TSS region transcription start site region 115700
Tssr115701 12 8302006 to 8302018 12 - TSS region transcription start site region 115701
Cpgi4394 12 8313150 to 8314069 919 CpG island CpG island 4394
Tssr112714 12 8313425 to 8313454 29 + TSS region transcription start site region 112714
Hs1bp3 12 8313433 to 8343824 30391 + protein coding gene HCLS1 binding protein 3
Tssr112715 12 8313455 to 8313462 7 + TSS region transcription start site region 112715
Tssr112716 12 8332201 to 8332214 13 + TSS region transcription start site region 112716
Tssr112717 12 8332218 to 8332228 10 + TSS region transcription start site region 112717
Gm48071 12 8335460 to 8336717 1257 - antisense lncRNA gene predicted gene, 48071
Tssr112718 12 8342932 to 8342955 23 + TSS region transcription start site region 112718
Tssr3784 12 8345144 to 8345154 10 + TSS region transcription start site region 3784
Tssr3785 12 8351365 to 8351375 10 - TSS region transcription start site region 3785
Tssr115702 12 8351381 to 8351403 22 - TSS region transcription start site region 115702
Tssr112719 12 8351540 to 8351545 5 + TSS region transcription start site region 112719
Tssr112720 12 8351571 to 8351576 5 + TSS region transcription start site region 112720
D12Mit183 12 8351876 to 8352145 269 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 183
Gm33134 12 8363712 to 8365800 2088 + lncRNA gene predicted gene, 33134
Tssr112721 12 8393284 to 8393287 3 + TSS region transcription start site region 112721
Gm48075 12 8394209 to 8400356 6147 + lincRNA gene predicted gene, 48075
Cpgi4395 12 8410971 to 8411281 310 CpG island CpG island 4395
Tssr112722 12 8433147 to 8433151 4 + TSS region transcription start site region 112722
Gm48076 12 8453504 to 8454918 1414 - unclassified gene predicted gene, 48076
D12Mit151 12 8467941 to 8468082 141 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 151
BC106175 12 8478874 to 8482157 3283 - unclassified gene cDNA sequence BC106175
Tssr115703 12 8480057 to 8480060 3 - TSS region transcription start site region 115703
Tssr115704 12 8480068 to 8480071 3 - TSS region transcription start site region 115704
Tssr115705 12 8480200 to 8480208 8 - TSS region transcription start site region 115705
Tssr115706 12 8480212 to 8480229 17 - TSS region transcription start site region 115706
Tssr115707 12 8480244 to 8480252 8 - TSS region transcription start site region 115707
Tssr3786 12 8480307 to 8480312 5 - TSS region transcription start site region 3786
Tssr3787 12 8480561 to 8480562 1 - TSS region transcription start site region 3787
Tssr115708 12 8482106 to 8482107 1 - TSS region transcription start site region 115708
Tssr115709 12 8482120 to 8482129 9 - TSS region transcription start site region 115709
Tssr115710 12 8482134 to 8482139 5 - TSS region transcription start site region 115710
Tssr115711 12 8482153 to 8482216 63 - TSS region transcription start site region 115711
Tssr115712 12 8496796 to 8496800 4 - TSS region transcription start site region 115712
Rhob 12 8497758 to 8499985 2227 - protein coding gene ras homolog family member B
Tssr115713 12 8498280 to 8498313 33 - TSS region transcription start site region 115713
Tssr115714 12 8498666 to 8498682 16 - TSS region transcription start site region 115714
Cpgi4396 12 8498744 to 8500488 1744 CpG island CpG island 4396
Tssr115715 12 8500001 to 8500017 16 - TSS region transcription start site region 115715
Tssr3788 12 8500184 to 8500216 32 + TSS region transcription start site region 3788
Tssr112723 12 8500253 to 8500278 25 + TSS region transcription start site region 112723
Tssr3789 12 8500325 to 8500332 7 + TSS region transcription start site region 3789
5033421B08Rik 12 8511201 to 8562681 51480 + antisense lncRNA gene RIKEN cDNA 5033421B08 gene
Tssr112724 12 8519696 to 8519733 37 + TSS region transcription start site region 112724
Tssr112725 12 8521929 to 8521939 10 + TSS region transcription start site region 112725
Slc7a15 12 8528483 to 8599066 70583 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 15
Tssr115716 12 8539560 to 8539614 54 - TSS region transcription start site region 115716
Tssr112726 12 8572152 to 8572166 14 + TSS region transcription start site region 112726
Gm40267 12 8603640 to 8641352 37712 - lncRNA gene predicted gene, 40267
Tssr115717 12 8637026 to 8637039 13 - TSS region transcription start site region 115717
Tssr112727 12 8637264 to 8637303 39 + TSS region transcription start site region 112727
Tssr115718 12 8640670 to 8640682 12 - TSS region transcription start site region 115718
Cpgi4397 12 8640744 to 8641302 558 CpG island CpG island 4397
Tssr115719 12 8641008 to 8641039 31 - TSS region transcription start site region 115719