Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:79584415-80004978

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rad51b 12 79297282 to 79814690 517408 + protein coding gene RAD51 paralog B
Tssr3876 12 79611239 to 79611243 4 + TSS region transcription start site region 3876
Tssr116838 12 79642826 to 79642857 31 - TSS region transcription start site region 116838
Tssr114110 12 79643023 to 79643027 4 + TSS region transcription start site region 114110
Tssr114111 12 79645812 to 79645833 21 + TSS region transcription start site region 114111
Tssr116839 12 79646628 to 79646664 36 - TSS region transcription start site region 116839
Tssr116840 12 79663616 to 79663619 3 - TSS region transcription start site region 116840
Tssr114112 12 79663834 to 79663837 3 + TSS region transcription start site region 114112
Tssr116841 12 79692159 to 79692170 11 - TSS region transcription start site region 116841
Tssr114113 12 79722381 to 79722392 11 + TSS region transcription start site region 114113
Tssr114114 12 79750486 to 79750528 42 + TSS region transcription start site region 114114
Tssr3877 12 79758247 to 79758272 25 + TSS region transcription start site region 3877
Tssr114115 12 79762373 to 79762388 15 + TSS region transcription start site region 114115
Tssr114116 12 79766858 to 79766877 19 + TSS region transcription start site region 114116
Tssr114117 12 79766882 to 79766924 42 + TSS region transcription start site region 114117
Tssr114118 12 79770045 to 79770059 14 + TSS region transcription start site region 114118
Tssr114119 12 79770084 to 79770092 8 + TSS region transcription start site region 114119
Tssr114120 12 79770439 to 79770442 3 + TSS region transcription start site region 114120
Gm36048 12 79789415 to 79799978 10563 - lncRNA gene predicted gene, 36048
Gm3596 12 79831109 to 79832326 1217 - lncRNA gene predicted gene 3596
Gm36132 12 79859280 to 79867578 8298 - lncRNA gene predicted gene, 36132
Tssr114121 12 79863253 to 79863254 1 + TSS region transcription start site region 114121
Gm46361 12 79873522 to 79904582 31060 + lncRNA gene predicted gene, 46361
D12Mit143 12 79880275 to 79880421 146 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 143
Tssr116842 12 79891125 to 79891142 17 - TSS region transcription start site region 116842
Tssr114122 12 79891315 to 79891322 7 + TSS region transcription start site region 114122
Gm46362 12 79892653 to 79893700 1047 + lncRNA gene predicted gene, 46362
9430078K24Rik 12 79917019 to 79936264 19245 - lincRNA gene RIKEN cDNA 9430078K24 gene
Tssr114123 12 79917547 to 79917558 11 + TSS region transcription start site region 114123
4933435C09Rik 12 79937479 to 79949491 12012 + lncRNA gene RIKEN cDNA 4933435C09 gene
Gm5654 12 79939165 to 79939639 474 - pseudogene predicted gene 5654
Tssr114124 12 79963739 to 79963743 4 + TSS region transcription start site region 114124
Cpgi4805 12 79965380 to 79965829 449 CpG island CpG island 4805
Tssr114125 12 79969605 to 79969655 50 + TSS region transcription start site region 114125
Gm8275 12 79979428 to 79979851 423 - pseudogene predicted gene 8275
D12Mit116 12 80000262 to 80000378 116 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 116