Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:78993442-79143460

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cplaq10 12 15291025 to 78993590 63702565 QTL circadian period of locomotor activity 10
Tmem229b 12 78961795 to 79007627 45832 - protein coding gene transmembrane protein 229B
Pbwg12 12 78993390 to 78993590 200 QTL postnatal body weight growth 12
D12Mit4 12 78993390 to 78993590 200 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 4
Cpgi4798 12 79006417 to 79007584 1167 CpG island CpG island 4798
Tssr116811 12 79007276 to 79007346 70 - TSS region transcription start site region 116811
Tssr116812 12 79007347 to 79007358 11 - TSS region transcription start site region 116812
Tssr116813 12 79017341 to 79017352 11 - TSS region transcription start site region 116813
Tssr116814 12 79017360 to 79017390 30 - TSS region transcription start site region 116814
Cpgi4799 12 79028694 to 79029964 1270 CpG island CpG island 4799
Tssr114073 12 79029150 to 79029193 43 + TSS region transcription start site region 114073
Plekhh1 12 79029163 to 79081655 52492 + protein coding gene pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
Tssr114074 12 79029196 to 79029218 22 + TSS region transcription start site region 114074
Gm35844 12 79029749 to 79040484 10735 - lncRNA gene predicted gene, 35844
Tssr114075 12 79040460 to 79040497 37 + TSS region transcription start site region 114075
Tssr116815 12 79068442 to 79068460 18 - TSS region transcription start site region 116815
Tssr114076 12 79069809 to 79069813 4 + TSS region transcription start site region 114076
Pigh 12 79080664 to 79089651 8987 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class H
9230116L04Rik 12 79088705 to 79103939 15234 - lincRNA gene RIKEN cDNA 9230116L04 gene
Cpgi4800 12 79089068 to 79089819 751 CpG island CpG island 4800
Tssr116816 12 79089623 to 79089660 37 - TSS region transcription start site region 116816
Tssr116817 12 79089661 to 79089687 26 - TSS region transcription start site region 116817
Tssr116818 12 79089698 to 79089719 21 - TSS region transcription start site region 116818
Tssr116819 12 79103913 to 79103950 37 - TSS region transcription start site region 116819
Gm27297 12 79107958 to 79108062 104 - snRNA gene predicted gene, 27297
Gm8255 12 79113720 to 79114024 304 + pseudogene predicted gene 8255
Cpgi4801 12 79130363 to 79131512 1149 CpG island CpG island 4801
Tssr3873 12 79130749 to 79130789 40 + TSS region transcription start site region 3873
Arg2 12 79130788 to 79156301 25513 + protein coding gene arginase type II
Tssr114077 12 79130800 to 79130816 16 + TSS region transcription start site region 114077
Tssr116820 12 79132168 to 79132183 15 - TSS region transcription start site region 116820
Tssr116821 12 79132193 to 79132215 22 - TSS region transcription start site region 116821
Tssr114078 12 79132364 to 79132367 3 + TSS region transcription start site region 114078
Tssr116822 12 79134536 to 79134537 1 - TSS region transcription start site region 116822
Tssr114079 12 79135653 to 79135657 4 + TSS region transcription start site region 114079
Tssr114080 12 79135979 to 79136007 28 + TSS region transcription start site region 114080
Tssr114081 12 79138324 to 79138360 36 + TSS region transcription start site region 114081
Tssr114082 12 79140001 to 79140028 27 + TSS region transcription start site region 114082
Gm40462 12 79140130 to 79147593 7463 - lncRNA gene predicted gene, 40462
Tssr114083 12 79141114 to 79141136 22 + TSS region transcription start site region 114083