Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:78894183-79084187

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cplaq10 12 15291025 to 78993590 63702565 QTL circadian period of locomotor activity 10
Plek2 12 78888691 to 78906964 18273 - protein coding gene pleckstrin 2
Cpgi4796 12 78906661 to 78907262 601 CpG island CpG island 4796
Tssr116799 12 78906929 to 78906970 41 - TSS region transcription start site region 116799
Tssr116800 12 78908375 to 78908387 12 - TSS region transcription start site region 116800
Gm46359 12 78910285 to 78946524 36239 + lncRNA gene predicted gene, 46359
Tssr114072 12 78911930 to 78911933 3 + TSS region transcription start site region 114072
Cpgi4797 12 78911953 to 78912354 401 CpG island CpG island 4797
Gm46360 12 78928859 to 78940474 11615 + lncRNA gene predicted gene, 46360
E130002L11Rik 12 78956931 to 78960214 3283 unclassified gene RIKEN cDNA E130002L11 gene
Tmem229b 12 78961795 to 79007627 45832 - protein coding gene transmembrane protein 229B
Tssr3871 12 78980523 to 78980524 1 - TSS region transcription start site region 3871
Tssr3872 12 78980536 to 78980538 2 - TSS region transcription start site region 3872
Tssr116801 12 78980569 to 78980587 18 - TSS region transcription start site region 116801
Tssr116802 12 78980590 to 78980600 10 - TSS region transcription start site region 116802
Tssr116803 12 78980601 to 78980624 23 - TSS region transcription start site region 116803
Tssr116804 12 78980673 to 78980680 7 - TSS region transcription start site region 116804
Tssr116805 12 78980712 to 78980719 7 - TSS region transcription start site region 116805
Tssr116806 12 78980743 to 78980754 11 - TSS region transcription start site region 116806
Tssr116807 12 78980758 to 78980817 59 - TSS region transcription start site region 116807
Tssr116808 12 78983471 to 78983472 1 - TSS region transcription start site region 116808
Tssr116809 12 78983476 to 78983493 17 - TSS region transcription start site region 116809
Tssr116810 12 78989183 to 78989187 4 - TSS region transcription start site region 116810
Pbwg12 12 78993390 to 78993590 200 QTL postnatal body weight growth 12
D12Mit4 12 78993390 to 78993590 200 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 4
Fbgl1 12 78993390 to 83115437 4122047 QTL fasting blood glucose 1
Cpgi4798 12 79006417 to 79007584 1167 CpG island CpG island 4798
Tssr116811 12 79007276 to 79007346 70 - TSS region transcription start site region 116811
Tssr116812 12 79007347 to 79007358 11 - TSS region transcription start site region 116812
Tssr116813 12 79017341 to 79017352 11 - TSS region transcription start site region 116813
Tssr116814 12 79017360 to 79017390 30 - TSS region transcription start site region 116814
Cpgi4799 12 79028694 to 79029964 1270 CpG island CpG island 4799
Tssr114073 12 79029150 to 79029193 43 + TSS region transcription start site region 114073
Plekhh1 12 79029163 to 79081655 52492 + protein coding gene pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
Tssr114074 12 79029196 to 79029218 22 + TSS region transcription start site region 114074
Gm35844 12 79029749 to 79040484 10735 - lncRNA gene predicted gene, 35844
Tssr114075 12 79040460 to 79040497 37 + TSS region transcription start site region 114075
Tssr116815 12 79068442 to 79068460 18 - TSS region transcription start site region 116815
Tssr114076 12 79069809 to 79069813 4 + TSS region transcription start site region 114076
Pigh 12 79080664 to 79089651 8987 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class H