MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:78603540-78843543

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gphn	12	78226379 to 78684772	458393	+	protein coding gene	gephyrin
Tssr114056	12	78691495 to 78691512	17	+	TSS region	transcription start site region 114056
Tssr114057	12	78691516 to 78691540	24	+	TSS region	transcription start site region 114057
Fam71d	12	78691535 to 78734516	42981	+	protein coding gene	family with sequence similarity 71, member D
Tssr114058	12	78691651 to 78691690	39	+	TSS region	transcription start site region 114058
Tssr114059	12	78723540 to 78723543	3	+	TSS region	transcription start site region 114059
Cpgi4794	12	78748317 to 78749717	1400		CpG island	CpG island 4794
Tssr114060	12	78748865 to 78748920	55	+	TSS region	transcription start site region 114060
Mpp5	12	78748910 to 78840714	91804	+	protein coding gene	membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
Tssr114061	12	78748955 to 78748971	16	+	TSS region	transcription start site region 114061
Tssr114062	12	78748996 to 78749019	23	+	TSS region	transcription start site region 114062
Tssr114063	12	78749027 to 78749041	14	+	TSS region	transcription start site region 114063
Tssr116791	12	78749589 to 78749600	11	-	TSS region	transcription start site region 116791
Gm25225	12	78752687 to 78752788	101	-	snRNA gene	predicted gene, 25225
Tssr114064	12	78802888 to 78802911	23	+	TSS region	transcription start site region 114064
Tssr116792	12	78842576 to 78842592	16	-	TSS region	transcription start site region 116792
Atp6v1d	12	78842982 to 78861638	18656	-	protein coding gene	ATPase, H+ transporting, lysosomal V1 subunit D