Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:77289899-78246616

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fut8 12 77238125 to 77476338 238213 + protein coding gene fucosyltransferase 8
Tssr114032 12 77332036 to 77332050 14 + TSS region transcription start site region 114032
Gm19234 12 77370492 to 77373312 2820 + pseudogene predicted gene, 19234
Gm24775 12 77393104 to 77393202 98 + snRNA gene predicted gene, 24775
Tssr3870 12 77418412 to 77418420 8 + TSS region transcription start site region 3870
Gm25926 12 77418417 to 77418576 159 + snRNA gene predicted gene, 25926
Gm19025 12 77452404 to 77453445 1041 - pseudogene predicted gene, 19025
Tssr116787 12 77453214 to 77453229 15 - TSS region transcription start site region 116787
Tssr114033 12 77467322 to 77467326 4 + TSS region transcription start site region 114033
Cpgi4792 12 77507663 to 77508144 481 CpG island CpG island 4792
Gm48177 12 77525282 to 77526398 1116 - pseudogene predicted gene, 48177
Gm35240 12 77553347 to 77569709 16362 + lincRNA gene predicted gene, 35240
Gm48196 12 77577094 to 77577383 289 + pseudogene predicted gene, 48196
Gm4864 12 77623549 to 77625009 1460 - pseudogene predicted gene 4864
Tssr116788 12 77625039 to 77625042 3 - TSS region transcription start site region 116788
4930458K08Rik 12 77683061 to 77689491 6430 + lincRNA gene RIKEN cDNA 4930458K08 gene
Gm35440 12 77749899 to 77786616 36717 + lncRNA gene predicted gene, 35440
Gm35488 12 77789877 to 77812835 22958 - lncRNA gene predicted gene, 35488
Gm24070 12 77814680 to 77814809 129 - snoRNA gene predicted gene, 24070
Gm8219 12 77819582 to 77819823 241 + pseudogene predicted gene 8219
Pbft6 12 78158653 to 78158653 0 QTL percent body fat 6
Gm24994 12 78165546 to 78165666 120 + snoRNA gene predicted gene, 24994
Tssr114034 12 78194225 to 78194238 13 + TSS region transcription start site region 114034
Gm6657 12 78194242 to 78209029 14787 + protein coding gene predicted gene 6657
Tssr114035 12 78197050 to 78197061 11 + TSS region transcription start site region 114035
Tssr114036 12 78197072 to 78197086 14 + TSS region transcription start site region 114036
Gm48226 12 78222286 to 78226525 4239 - bidirectional promoter lncRNA gene predicted gene, 48226
Cpgi4793 12 78225774 to 78227790 2016 CpG island CpG island 4793
Tssr114037 12 78226349 to 78226360 11 + TSS region transcription start site region 114037
Tssr114038 12 78226370 to 78226414 44 + TSS region transcription start site region 114038
Gphn 12 78226379 to 78684772 458393 + protein coding gene gephyrin
Tssr114039 12 78226418 to 78226419 1 + TSS region transcription start site region 114039
Tssr114040 12 78226429 to 78226440 11 + TSS region transcription start site region 114040
Tssr114041 12 78226586 to 78226620 34 + TSS region transcription start site region 114041
Tssr114042 12 78226627 to 78226652 25 + TSS region transcription start site region 114042
Tssr114043 12 78226669 to 78226680 11 + TSS region transcription start site region 114043
Tssr114044 12 78226685 to 78226710 25 + TSS region transcription start site region 114044
Tssr114045 12 78226712 to 78226773 61 + TSS region transcription start site region 114045
Tssr114046 12 78227559 to 78227562 3 + TSS region transcription start site region 114046
Tssr114047 12 78230498 to 78230502 4 + TSS region transcription start site region 114047