Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:76446296-76906301

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm10451 12 76444497 to 76448698 4201 + lincRNA gene predicted gene 10451
Tssr116730 12 76474085 to 76474091 6 - TSS region transcription start site region 116730
Gm47053 12 76492355 to 76492511 156 + pseudogene predicted gene, 47053
Tssr113975 12 76497975 to 76497979 4 + TSS region transcription start site region 113975
Gm40445 12 76523491 to 76528269 4778 + lncRNA gene predicted gene, 40445
Cpgi4783 12 76532879 to 76534258 1379 CpG island CpG island 4783
Mir5135 12 76533134 to 76533212 78 - miRNA gene microRNA 5135
Plekhg3 12 76533246 to 76580489 47243 + protein coding gene pleckstrin homology domain containing, family G (with RhoGef domain) member 3
Tssr113976 12 76533540 to 76533597 57 + TSS region transcription start site region 113976
Tssr113977 12 76533613 to 76533625 12 + TSS region transcription start site region 113977
Tssr113978 12 76533631 to 76533646 15 + TSS region transcription start site region 113978
6330522J23Rik 12 76534213 to 76535366 1153 unclassified gene RIKEN cDNA 6330522J23 gene
AI463170 12 76546972 to 76547925 953 - antisense lncRNA gene expressed sequence AI463170
Tssr113979 12 76547076 to 76547088 12 + TSS region transcription start site region 113979
Tssr116731 12 76547848 to 76547874 26 - TSS region transcription start site region 116731
Tssr113980 12 76571523 to 76571539 16 + TSS region transcription start site region 113980
Tssr113981 12 76571544 to 76571567 23 + TSS region transcription start site region 113981
Tssr113982 12 76573104 to 76573115 11 + TSS region transcription start site region 113982
Sptb 12 76580488 to 76710547 130059 - protein coding gene spectrin beta, erythrocytic
Tssr116732 12 76596701 to 76596722 21 - TSS region transcription start site region 116732
Tssr116733 12 76597400 to 76597412 12 - TSS region transcription start site region 116733
Tssr116734 12 76597590 to 76597619 29 - TSS region transcription start site region 116734
Tssr116735 12 76609411 to 76609417 6 - TSS region transcription start site region 116735
Tssr116736 12 76612647 to 76612660 13 - TSS region transcription start site region 116736
Tssr116737 12 76612662 to 76612669 7 - TSS region transcription start site region 116737
Tssr116738 12 76612678 to 76612701 23 - TSS region transcription start site region 116738
Tssr116739 12 76612708 to 76612728 20 - TSS region transcription start site region 116739
Tssr116740 12 76643728 to 76643743 15 - TSS region transcription start site region 116740
Tssr116741 12 76643763 to 76643775 12 - TSS region transcription start site region 116741
Tssr116742 12 76643819 to 76643835 16 - TSS region transcription start site region 116742
Tssr116743 12 76643919 to 76643922 3 - TSS region transcription start site region 116743
Tssr116744 12 76668696 to 76668709 13 - TSS region transcription start site region 116744
Tssr113983 12 76676296 to 76676301 5 + TSS region transcription start site region 113983
Cpgi4784 12 76676515 to 76676673 158 CpG island CpG island 4784
Gm24010 12 76691980 to 76692261 281 + unclassified non-coding RNA gene predicted gene, 24010
Cpgi4785 12 76709332 to 76711018 1686 CpG island CpG island 4785
Tssr116745 12 76709955 to 76709995 40 - TSS region transcription start site region 116745
Tssr116746 12 76709997 to 76710026 29 - TSS region transcription start site region 116746
Tssr116747 12 76710029 to 76710054 25 - TSS region transcription start site region 116747
Tssr116748 12 76710077 to 76710088 11 - TSS region transcription start site region 116748
Tssr116749 12 76710095 to 76710107 12 - TSS region transcription start site region 116749
Tssr116750 12 76710120 to 76710153 33 - TSS region transcription start site region 116750
Tssr113984 12 76742675 to 76742678 3 + TSS region transcription start site region 113984
Cpgi4786 12 76765409 to 76766094 685 CpG island CpG island 4786
Tssr113985 12 76765527 to 76765584 57 + TSS region transcription start site region 113985
Churc1 12 76765573 to 76783180 17607 + protein coding gene churchill domain containing 1
Tssr113986 12 76765843 to 76765857 14 + TSS region transcription start site region 113986
Tssr113987 12 76773775 to 76773779 4 + TSS region transcription start site region 113987
Tssr113988 12 76775129 to 76775141 12 + TSS region transcription start site region 113988
Tssr113989 12 76782272 to 76782276 4 + TSS region transcription start site region 113989
Gpx2 12 76792335 to 76795554 3219 - protein coding gene glutathione peroxidase 2
Tssr113990 12 76792761 to 76792788 27 + TSS region transcription start site region 113990
Tssr116751 12 76795316 to 76795355 39 - TSS region transcription start site region 116751
Tssr116752 12 76795425 to 76795464 39 - TSS region transcription start site region 116752
Tssr116753 12 76795471 to 76795478 7 - TSS region transcription start site region 116753
Tssr116754 12 76795489 to 76795521 32 - TSS region transcription start site region 116754
Tssr3866 12 76795549 to 76795552 3 - TSS region transcription start site region 3866
Rab15 12 76797960 to 76822763 24803 - protein coding gene RAB15, member RAS oncogene family
Gm34988 12 76818317 to 76818794 477 + lncRNA gene predicted gene, 34988
Tssr116755 12 76818389 to 76818395 6 - TSS region transcription start site region 116755
Cpgi4787 12 76821926 to 76823078 1152 CpG island CpG island 4787
Tssr116756 12 76822386 to 76822414 28 - TSS region transcription start site region 116756
Tssr116757 12 76822420 to 76822431 11 - TSS region transcription start site region 116757
Tssr116758 12 76822465 to 76822508 43 - TSS region transcription start site region 116758
Tssr116759 12 76822510 to 76822558 48 - TSS region transcription start site region 116759
Tssr116760 12 76822736 to 76822757 21 - TSS region transcription start site region 116760
Cpgi4788 12 76837208 to 76838092 884 CpG island CpG island 4788
Fntb 12 76837391 to 76921412 84021 + protein coding gene farnesyltransferase, CAAX box, beta
Tssr113991 12 76837408 to 76837466 58 + TSS region transcription start site region 113991
Tssr113992 12 76837469 to 76837480 11 + TSS region transcription start site region 113992
Gm46357 12 76858709 to 76869172 10463 - lncRNA gene predicted gene, 46357
Tssr113993 12 76887045 to 76887083 38 + TSS region transcription start site region 113993
Gm46358 12 76896781 to 76910279 13498 - lncRNA gene predicted gene, 46358
Tssr113994 12 76896813 to 76896814 1 + TSS region transcription start site region 113994
Tssr113995 12 76902144 to 76902155 11 + TSS region transcription start site region 113995
Tssr113996 12 76902170 to 76902182 12 + TSS region transcription start site region 113996
Tssr113997 12 76902187 to 76902201 14 + TSS region transcription start site region 113997
Tssr113998 12 76902207 to 76902231 24 + TSS region transcription start site region 113998