Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:76423491-76628269

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp1r36 12 76417599 to 76439492 21893 + protein coding gene protein phosphatase 1, regulatory subunit 36
Cpgi4782 12 76435109 to 76435322 213 CpG island CpG island 4782
Gm10451 12 76444497 to 76448698 4201 + lincRNA gene predicted gene 10451
Tssr116730 12 76474085 to 76474091 6 - TSS region transcription start site region 116730
Gm47053 12 76492355 to 76492511 156 + pseudogene predicted gene, 47053
Tssr113975 12 76497975 to 76497979 4 + TSS region transcription start site region 113975
Gm40445 12 76523491 to 76528269 4778 + lncRNA gene predicted gene, 40445
Cpgi4783 12 76532879 to 76534258 1379 CpG island CpG island 4783
Mir5135 12 76533134 to 76533212 78 - miRNA gene microRNA 5135
Plekhg3 12 76533246 to 76580489 47243 + protein coding gene pleckstrin homology domain containing, family G (with RhoGef domain) member 3
Tssr113976 12 76533540 to 76533597 57 + TSS region transcription start site region 113976
Tssr113977 12 76533613 to 76533625 12 + TSS region transcription start site region 113977
Tssr113978 12 76533631 to 76533646 15 + TSS region transcription start site region 113978
6330522J23Rik 12 76534213 to 76535366 1153 unclassified gene RIKEN cDNA 6330522J23 gene
AI463170 12 76546972 to 76547925 953 - antisense lncRNA gene expressed sequence AI463170
Tssr113979 12 76547076 to 76547088 12 + TSS region transcription start site region 113979
Tssr116731 12 76547848 to 76547874 26 - TSS region transcription start site region 116731
Tssr113980 12 76571523 to 76571539 16 + TSS region transcription start site region 113980
Tssr113981 12 76571544 to 76571567 23 + TSS region transcription start site region 113981
Tssr113982 12 76573104 to 76573115 11 + TSS region transcription start site region 113982
Sptb 12 76580488 to 76710547 130059 - protein coding gene spectrin beta, erythrocytic
Tssr116732 12 76596701 to 76596722 21 - TSS region transcription start site region 116732
Tssr116733 12 76597400 to 76597412 12 - TSS region transcription start site region 116733
Tssr116734 12 76597590 to 76597619 29 - TSS region transcription start site region 116734
Tssr116735 12 76609411 to 76609417 6 - TSS region transcription start site region 116735
Tssr116736 12 76612647 to 76612660 13 - TSS region transcription start site region 116736
Tssr116737 12 76612662 to 76612669 7 - TSS region transcription start site region 116737
Tssr116738 12 76612678 to 76612701 23 - TSS region transcription start site region 116738
Tssr116739 12 76612708 to 76612728 20 - TSS region transcription start site region 116739