Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:76227062-76387074

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tex21 12 76198686 to 76246746 48060 - protein coding gene testis expressed gene 21
Tssr116709 12 76229446 to 76229468 22 - TSS region transcription start site region 116709
Tssr116710 12 76246736 to 76246755 19 - TSS region transcription start site region 116710
Gm47525 12 76254562 to 76255334 772 - bidirectional promoter lncRNA gene predicted gene, 47525
Cpgi4777 12 76254887 to 76255667 780 CpG island CpG island 4777
Tssr116711 12 76255046 to 76255057 11 - TSS region transcription start site region 116711
Tssr116712 12 76255072 to 76255110 38 - TSS region transcription start site region 116712
Tssr113934 12 76255209 to 76255239 30 + TSS region transcription start site region 113934
Tssr113935 12 76255244 to 76255257 13 + TSS region transcription start site region 113935
Tssr113936 12 76255290 to 76255307 17 + TSS region transcription start site region 113936
Mthfd1 12 76255298 to 76319803 64505 + protein coding gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
Tssr113937 12 76255332 to 76255337 5 + TSS region transcription start site region 113937
Tssr113938 12 76255348 to 76255369 21 + TSS region transcription start site region 113938
Tssr113939 12 76255371 to 76255436 65 + TSS region transcription start site region 113939
Tssr113940 12 76255453 to 76255472 19 + TSS region transcription start site region 113940
Tssr113941 12 76255483 to 76255494 11 + TSS region transcription start site region 113941
Tssr116713 12 76264884 to 76264885 1 - TSS region transcription start site region 116713
Gm40444 12 76273241 to 76274264 1023 - lncRNA gene predicted gene, 40444
Tssr116714 12 76274215 to 76274245 30 - TSS region transcription start site region 116714
Gm47526 12 76277386 to 76277716 330 - pseudogene predicted gene, 47526
Gm34868 12 76286882 to 76300303 13421 - antisense lncRNA gene predicted gene, 34868
Tssr113942 12 76294137 to 76294183 46 + TSS region transcription start site region 113942
Tssr116715 12 76306964 to 76307007 43 - TSS region transcription start site region 116715
Tssr113943 12 76307062 to 76307074 12 + TSS region transcription start site region 113943
Tssr113944 12 76307099 to 76307111 12 + TSS region transcription start site region 113944
Tssr113945 12 76307143 to 76307157 14 + TSS region transcription start site region 113945
Gm40443 12 76309841 to 76323169 13328 - lncRNA gene predicted gene, 40443
Tssr113946 12 76319057 to 76319061 4 + TSS region transcription start site region 113946
Cpgi4778 12 76324613 to 76325299 686 CpG island CpG island 4778
Tssr113947 12 76324838 to 76324841 3 + TSS region transcription start site region 113947
Tssr113948 12 76324860 to 76324898 38 + TSS region transcription start site region 113948
Akap5 12 76324891 to 76334153 9262 + protein coding gene A kinase (PRKA) anchor protein 5
Tssr113949 12 76324910 to 76324932 22 + TSS region transcription start site region 113949
Tssr113950 12 76328929 to 76328945 16 + TSS region transcription start site region 113950
Tssr113951 12 76329057 to 76329070 13 + TSS region transcription start site region 113951
Tssr113952 12 76329274 to 76329283 9 + TSS region transcription start site region 113952
Tssr113953 12 76332405 to 76332409 4 + TSS region transcription start site region 113953
A430103D13Rik 12 76344525 to 76345381 856 - unclassified gene RIKEN cDNA A430103D13 gene
Zbtb25 12 76348900 to 76370216 21316 - protein coding gene zinc finger and BTB domain containing 25
Tssr113954 12 76367315 to 76367326 11 + TSS region transcription start site region 113954
Tssr113955 12 76367329 to 76367339 10 + TSS region transcription start site region 113955
Tssr113956 12 76367343 to 76367354 11 + TSS region transcription start site region 113956
Cpgi4779 12 76368967 to 76371706 2739 CpG island CpG island 4779
Tssr116716 12 76369154 to 76369167 13 - TSS region transcription start site region 116716
Tssr116717 12 76369171 to 76369181 10 - TSS region transcription start site region 116717
Tssr116718 12 76369385 to 76369469 84 - TSS region transcription start site region 116718
Tssr116719 12 76369474 to 76369517 43 - TSS region transcription start site region 116719
Tssr116720 12 76369520 to 76369585 65 - TSS region transcription start site region 116720
Tssr116721 12 76369586 to 76369598 12 - TSS region transcription start site region 116721
Tssr116722 12 76369673 to 76369684 11 - TSS region transcription start site region 116722
Tssr116723 12 76369691 to 76369698 7 - TSS region transcription start site region 116723
Tssr116724 12 76369731 to 76369765 34 - TSS region transcription start site region 116724
Tssr116725 12 76369820 to 76369829 9 - TSS region transcription start site region 116725
Zbtb1 12 76370266 to 76396950 26684 + protein coding gene zinc finger and BTB domain containing 1
Tssr116726 12 76370347 to 76370353 6 - TSS region transcription start site region 116726
Tssr116727 12 76370375 to 76370394 19 - TSS region transcription start site region 116727
Tssr113957 12 76370476 to 76370508 32 + TSS region transcription start site region 113957
Tssr113958 12 76370513 to 76370528 15 + TSS region transcription start site region 113958
Tssr113959 12 76370537 to 76370620 83 + TSS region transcription start site region 113959
Tssr116728 12 76370950 to 76370977 27 - TSS region transcription start site region 116728
Tssr113960 12 76371127 to 76371140 13 + TSS region transcription start site region 113960
Tssr116729 12 76371424 to 76371441 17 - TSS region transcription start site region 116729