Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:76129446-76329468

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Esr2 12 76120419 to 76177259 56840 - protein coding gene estrogen receptor 2 (beta)
D12Mit286 12 76135343 to 76135425 82 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 286
Gm7862 12 76152336 to 76152627 291 - pseudogene predicted gene 7862
Cpgi4774 12 76152495 to 76152850 355 CpG island CpG island 4774
Cpgi4775 12 76176926 to 76177430 504 CpG island CpG island 4775
Tssr116703 12 76177061 to 76177071 10 - TSS region transcription start site region 116703
Tssr116704 12 76177251 to 76177265 14 - TSS region transcription start site region 116704
Cpgi4776 12 76196092 to 76196326 234 CpG island CpG island 4776
Tex21 12 76198686 to 76246746 48060 - protein coding gene testis expressed gene 21
Tssr113932 12 76215371 to 76215382 11 + TSS region transcription start site region 113932
Tssr113933 12 76215442 to 76215451 9 + TSS region transcription start site region 113933
Tssr116705 12 76216863 to 76216872 9 - TSS region transcription start site region 116705
Tssr116706 12 76216875 to 76216897 22 - TSS region transcription start site region 116706
Tssr116707 12 76216947 to 76216985 38 - TSS region transcription start site region 116707
Tssr116708 12 76222242 to 76222262 20 - TSS region transcription start site region 116708
Tssr116709 12 76229446 to 76229468 22 - TSS region transcription start site region 116709
Tssr116710 12 76246736 to 76246755 19 - TSS region transcription start site region 116710
Gm47525 12 76254562 to 76255334 772 - bidirectional promoter lncRNA gene predicted gene, 47525
Cpgi4777 12 76254887 to 76255667 780 CpG island CpG island 4777
Tssr116711 12 76255046 to 76255057 11 - TSS region transcription start site region 116711
Tssr116712 12 76255072 to 76255110 38 - TSS region transcription start site region 116712
Tssr113934 12 76255209 to 76255239 30 + TSS region transcription start site region 113934
Tssr113935 12 76255244 to 76255257 13 + TSS region transcription start site region 113935
Tssr113936 12 76255290 to 76255307 17 + TSS region transcription start site region 113936
Mthfd1 12 76255298 to 76319803 64505 + protein coding gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
Tssr113937 12 76255332 to 76255337 5 + TSS region transcription start site region 113937
Tssr113938 12 76255348 to 76255369 21 + TSS region transcription start site region 113938
Tssr113939 12 76255371 to 76255436 65 + TSS region transcription start site region 113939
Tssr113940 12 76255453 to 76255472 19 + TSS region transcription start site region 113940
Tssr113941 12 76255483 to 76255494 11 + TSS region transcription start site region 113941
Tssr116713 12 76264884 to 76264885 1 - TSS region transcription start site region 116713
Gm40444 12 76273241 to 76274264 1023 - lncRNA gene predicted gene, 40444
Tssr116714 12 76274215 to 76274245 30 - TSS region transcription start site region 116714
Gm47526 12 76277386 to 76277716 330 - pseudogene predicted gene, 47526
Gm34868 12 76286882 to 76300303 13421 - antisense lncRNA gene predicted gene, 34868
Tssr113942 12 76294137 to 76294183 46 + TSS region transcription start site region 113942
Tssr116715 12 76306964 to 76307007 43 - TSS region transcription start site region 116715
Tssr113943 12 76307062 to 76307074 12 + TSS region transcription start site region 113943
Tssr113944 12 76307099 to 76307111 12 + TSS region transcription start site region 113944
Tssr113945 12 76307143 to 76307157 14 + TSS region transcription start site region 113945
Gm40443 12 76309841 to 76323169 13328 - lncRNA gene predicted gene, 40443
Tssr113946 12 76319057 to 76319061 4 + TSS region transcription start site region 113946
Cpgi4778 12 76324613 to 76325299 686 CpG island CpG island 4778
Tssr113947 12 76324838 to 76324841 3 + TSS region transcription start site region 113947
Tssr113948 12 76324860 to 76324898 38 + TSS region transcription start site region 113948
Akap5 12 76324891 to 76334153 9262 + protein coding gene A kinase (PRKA) anchor protein 5
Tssr113949 12 76324910 to 76324932 22 + TSS region transcription start site region 113949
Tssr113950 12 76328929 to 76328945 16 + TSS region transcription start site region 113950
Tssr113951 12 76329057 to 76329070 13 + TSS region transcription start site region 113951
Tssr113952 12 76329274 to 76329283 9 + TSS region transcription start site region 113952