Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:75356458-75836489

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rhoj 12 75308322 to 75401456 93134 + protein coding gene ras homolog family member J
Tssr113908 12 75394001 to 75394031 30 + TSS region transcription start site region 113908
Tssr116679 12 75400224 to 75400234 10 - TSS region transcription start site region 116679
Gphb5 12 75411722 to 75416781 5059 - protein coding gene glycoprotein hormone beta 5
Gm34613 12 75416091 to 75422808 6717 + lncRNA gene predicted gene, 34613
Ppp2r5e 12 75450881 to 75596245 145364 - protein coding gene protein phosphatase 2, regulatory subunit B', epsilon
Tssr116680 12 75483368 to 75483372 4 - TSS region transcription start site region 116680
Gm47690 12 75505800 to 75508745 2945 - unclassified gene predicted gene, 47690
Tssr3863 12 75521510 to 75521513 3 + TSS region transcription start site region 3863
Tssr3864 12 75529262 to 75529265 3 + TSS region transcription start site region 3864
D12Mit226 12 75537627 to 75537747 120 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 226
Tssr116681 12 75549636 to 75549640 4 - TSS region transcription start site region 116681
Tssr116682 12 75549643 to 75549661 18 - TSS region transcription start site region 116682
Tssr116683 12 75549668 to 75549695 27 - TSS region transcription start site region 116683
D12Mit129 12 75558803 to 75558903 100 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 129
Gm47689 12 75579865 to 75581699 1834 + antisense lncRNA gene predicted gene, 47689
Tssr116684 12 75583432 to 75583436 4 - TSS region transcription start site region 116684
Tssr116685 12 75589542 to 75589544 2 - TSS region transcription start site region 116685
Tssr113909 12 75591357 to 75591363 6 + TSS region transcription start site region 113909
Cpgi4769 12 75595343 to 75596947 1604 CpG island CpG island 4769
Tssr116686 12 75596108 to 75596113 5 - TSS region transcription start site region 116686
Tssr116687 12 75596163 to 75596176 13 - TSS region transcription start site region 116687
Tssr116688 12 75596180 to 75596194 14 - TSS region transcription start site region 116688
Tssr116689 12 75596195 to 75596261 66 - TSS region transcription start site region 116689
Tssr113910 12 75596458 to 75596489 31 + TSS region transcription start site region 113910
Tssr116690 12 75599332 to 75599333 1 - TSS region transcription start site region 116690
Gm34666 12 75609978 to 75616626 6648 - lncRNA gene predicted gene, 34666
Wdr89 12 75630596 to 75669537 38941 - protein coding gene WD repeat domain 89
Rplp2-ps1 12 75630918 to 75631749 831 - pseudogene ribosomal protein, large P2, pseudogene 1
Cpgi4770 12 75631189 to 75631379 190 CpG island CpG island 4770
Tssr116691 12 75631200 to 75631228 28 - TSS region transcription start site region 116691
Tssr116692 12 75631327 to 75631360 33 - TSS region transcription start site region 116692
Tssr116693 12 75631371 to 75631380 9 - TSS region transcription start site region 116693
Cpgi4771 12 75669146 to 75670071 925 CpG island CpG island 4771
Tssr116694 12 75669496 to 75669544 48 - TSS region transcription start site region 116694
Gm34717 12 75669725 to 75688264 18539 + lncRNA gene predicted gene, 34717
Tssr113911 12 75669813 to 75669830 17 + TSS region transcription start site region 113911
Tssr113912 12 75669835 to 75669878 43 + TSS region transcription start site region 113912
Gm40890 12 75701908 to 75712313 10405 + lncRNA gene predicted gene, 40890
Sgpp1 12 75714249 to 75735729 21480 - protein coding gene sphingosine-1-phosphate phosphatase 1
Tssr116695 12 75716412 to 75716424 12 - TSS region transcription start site region 116695
Tssr116696 12 75722714 to 75722729 15 - TSS region transcription start site region 116696
Cpgi4772 12 75734804 to 75736077 1273 CpG island CpG island 4772
Tssr116697 12 75735633 to 75735712 79 - TSS region transcription start site region 116697
Tssr116698 12 75735729 to 75735736 7 - TSS region transcription start site region 116698
Tssr116699 12 75735828 to 75735831 3 - TSS region transcription start site region 116699
Tssr116700 12 75745775 to 75745782 7 - TSS region transcription start site region 116700
Gm40447 12 75745779 to 75819628 73849 - protein coding gene predicted gene, 40447
Tssr113913 12 75750072 to 75750117 45 + TSS region transcription start site region 113913
Cpgi4773 12 75817914 to 75819458 1544 CpG island CpG island 4773
Tssr116701 12 75818181 to 75818225 44 - TSS region transcription start site region 116701
Tssr113914 12 75818294 to 75818356 62 + TSS region transcription start site region 113914
Syne2 12 75818318 to 76110928 292610 + protein coding gene spectrin repeat containing, nuclear envelope 2
Tssr113915 12 75818376 to 75818385 9 + TSS region transcription start site region 113915
A930027M08Rik 12 75820285 to 75820751 466 unclassified gene RIKEN cDNA A930027M08 gene