Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:74807876-75568016

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39473 12 74825300 to 74827351 2051 + lincRNA gene predicted gene, 39473
4930442G10Rik 12 74842738 to 74849666 6928 + lincRNA gene RIKEN cDNA 4930442G10 gene
D12Mit202 12 74865419 to 74865538 119 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 202
Tssr116674 12 74889978 to 74889996 18 - TSS region transcription start site region 116674
Tssr116675 12 74890090 to 74890111 21 - TSS region transcription start site region 116675
Kcnh5 12 74897220 to 75177332 280112 - protein coding gene potassium voltage-gated channel, subfamily H (eag-related), member 5
Tssr3861 12 74968258 to 74968260 2 + TSS region transcription start site region 3861
Cpgi4767 12 75176381 to 75177533 1152 CpG island CpG island 4767
Tssr116676 12 75176776 to 75176808 32 - TSS region transcription start site region 116676
Tssr116677 12 75177325 to 75177359 34 - TSS region transcription start site region 116677
D12Mit175 12 75187876 to 75188016 140 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 175
Tssr113896 12 75220339 to 75220341 2 + TSS region transcription start site region 113896
Tssr116678 12 75221387 to 75221388 1 - TSS region transcription start site region 116678
D12Mit287 12 75249564 to 75249686 122 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 287
Tssr113897 12 75277715 to 75277723 8 + TSS region transcription start site region 113897
Tssr113898 12 75308062 to 75308079 17 + TSS region transcription start site region 113898
Tssr113899 12 75308308 to 75308317 9 + TSS region transcription start site region 113899
Rhoj 12 75308322 to 75401456 93134 + protein coding gene ras homolog family member J
Tssr113900 12 75308339 to 75308358 19 + TSS region transcription start site region 113900
Tssr113901 12 75308387 to 75308408 21 + TSS region transcription start site region 113901
Tssr113902 12 75308416 to 75308434 18 + TSS region transcription start site region 113902
Tssr113903 12 75308439 to 75308450 11 + TSS region transcription start site region 113903
Tssr113904 12 75308526 to 75308544 18 + TSS region transcription start site region 113904
Tssr3862 12 75308548 to 75308562 14 + TSS region transcription start site region 3862
Tssr113905 12 75308595 to 75308606 11 + TSS region transcription start site region 113905
Tssr113906 12 75308627 to 75308634 7 + TSS region transcription start site region 113906
Tssr113907 12 75308652 to 75308671 19 + TSS region transcription start site region 113907
Cpgi4768 12 75308676 to 75309158 482 CpG island CpG island 4768
C230007H23Rik 12 75337902 to 75342120 4218 unclassified gene RIKEN cDNA C230007H23 gene
Tssr113908 12 75394001 to 75394031 30 + TSS region transcription start site region 113908
Tssr116679 12 75400224 to 75400234 10 - TSS region transcription start site region 116679
Gphb5 12 75411722 to 75416781 5059 - protein coding gene glycoprotein hormone beta 5
Gm34613 12 75416091 to 75422808 6717 + lncRNA gene predicted gene, 34613
Ppp2r5e 12 75450881 to 75596245 145364 - protein coding gene protein phosphatase 2, regulatory subunit B', epsilon
Tssr116680 12 75483368 to 75483372 4 - TSS region transcription start site region 116680
Gm47690 12 75505800 to 75508745 2945 - unclassified gene predicted gene, 47690
Tssr3863 12 75521510 to 75521513 3 + TSS region transcription start site region 3863
Tssr3864 12 75529262 to 75529265 3 + TSS region transcription start site region 3864
D12Mit226 12 75537627 to 75537747 120 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 226
Tssr116681 12 75549636 to 75549640 4 - TSS region transcription start site region 116681
Tssr116682 12 75549643 to 75549661 18 - TSS region transcription start site region 116682
Tssr116683 12 75549668 to 75549695 27 - TSS region transcription start site region 116683
D12Mit129 12 75558803 to 75558903 100 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 129