Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:74100246-75310728

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syt16 12 73997610 to 74267916 270306 + protein coding gene synaptotagmin XVI
Gm40889 12 74140536 to 74146763 6227 + lncRNA gene predicted gene, 40889
Tssr113881 12 74208359 to 74208360 1 + TSS region transcription start site region 113881
Gm29587 12 74222498 to 74235140 12642 - antisense lncRNA gene predicted gene 29587
D12Dcr6 12 74233818 to 74233921 103 DNA segment DNA Segment, Chr 12, Derry C. Roopenian 6
Cpgi4765 12 74283850 to 74284748 898 CpG island CpG island 4765
Tssr113882 12 74284271 to 74284310 39 + TSS region transcription start site region 113882
1700086L19Rik 12 74284276 to 74295950 11674 + lincRNA gene RIKEN cDNA 1700086L19 gene
Tssr113883 12 74284318 to 74284330 12 + TSS region transcription start site region 113883
Tssr113884 12 74284348 to 74284353 5 + TSS region transcription start site region 113884
Tssr113885 12 74296692 to 74296697 5 + TSS region transcription start site region 113885
Tssr113886 12 74296858 to 74296861 3 + TSS region transcription start site region 113886
Dbpht2 12 74297474 to 74300468 2994 + lincRNA gene DNA binding protein with his-thr domain
Tssr113887 12 74298323 to 74298334 11 + TSS region transcription start site region 113887
Tssr113888 12 74298778 to 74298789 11 + TSS region transcription start site region 113888
Gm34552 12 74314201 to 74317162 2961 - lincRNA gene predicted gene, 34552
Gm11042 12 74315110 to 74316394 1284 - protein coding gene predicted gene 11042
Tssr116672 12 74317074 to 74317118 44 - TSS region transcription start site region 116672
Tssr113889 12 74346211 to 74346216 5 + TSS region transcription start site region 113889
Gm9544 12 74346340 to 74348821 2481 + pseudogene predicted gene 9544
Gm47618 12 74593652 to 74594100 448 - pseudogene predicted gene, 47618
Gm47619 12 74705246 to 74705728 482 - pseudogene predicted gene, 47619
Tssr113890 12 74803865 to 74803875 10 + TSS region transcription start site region 113890
Cpgi4766 12 74803933 to 74804502 569 CpG island CpG island 4766
Tssr116673 12 74803968 to 74803971 3 - TSS region transcription start site region 116673
Tssr113891 12 74804137 to 74804179 42 + TSS region transcription start site region 113891
Tssr113892 12 74804220 to 74804222 2 + TSS region transcription start site region 113892
Tssr113893 12 74804270 to 74804281 11 + TSS region transcription start site region 113893
Tssr113894 12 74804323 to 74804343 20 + TSS region transcription start site region 113894
Tssr113895 12 74804381 to 74804415 34 + TSS region transcription start site region 113895
Gm39473 12 74825300 to 74827351 2051 + lincRNA gene predicted gene, 39473
4930442G10Rik 12 74842738 to 74849666 6928 + lincRNA gene RIKEN cDNA 4930442G10 gene
D12Mit202 12 74865419 to 74865538 119 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 202
Tssr116674 12 74889978 to 74889996 18 - TSS region transcription start site region 116674
Tssr116675 12 74890090 to 74890111 21 - TSS region transcription start site region 116675
Kcnh5 12 74897220 to 75177332 280112 - protein coding gene potassium voltage-gated channel, subfamily H (eag-related), member 5
Tssr3861 12 74968258 to 74968260 2 + TSS region transcription start site region 3861
Cpgi4767 12 75176381 to 75177533 1152 CpG island CpG island 4767
Tssr116676 12 75176776 to 75176808 32 - TSS region transcription start site region 116676
Tssr116677 12 75177325 to 75177359 34 - TSS region transcription start site region 116677
D12Mit175 12 75187876 to 75188016 140 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 175
Tssr113896 12 75220339 to 75220341 2 + TSS region transcription start site region 113896
Tssr116678 12 75221387 to 75221388 1 - TSS region transcription start site region 116678
D12Mit287 12 75249564 to 75249686 122 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 287
Tssr113897 12 75277715 to 75277723 8 + TSS region transcription start site region 113897
Tssr113898 12 75308062 to 75308079 17 + TSS region transcription start site region 113898
Tssr113899 12 75308308 to 75308317 9 + TSS region transcription start site region 113899
Rhoj 12 75308322 to 75401456 93134 + protein coding gene ras homolog family member J
Tssr113900 12 75308339 to 75308358 19 + TSS region transcription start site region 113900
Tssr113901 12 75308387 to 75308408 21 + TSS region transcription start site region 113901
Tssr113902 12 75308416 to 75308434 18 + TSS region transcription start site region 113902
Tssr113903 12 75308439 to 75308450 11 + TSS region transcription start site region 113903
Tssr113904 12 75308526 to 75308544 18 + TSS region transcription start site region 113904
Tssr3862 12 75308548 to 75308562 14 + TSS region transcription start site region 3862
Tssr113905 12 75308595 to 75308606 11 + TSS region transcription start site region 113905
Tssr113906 12 75308627 to 75308634 7 + TSS region transcription start site region 113906
Tssr113907 12 75308652 to 75308671 19 + TSS region transcription start site region 113907
Cpgi4768 12 75308676 to 75309158 482 CpG island CpG island 4768