Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:73892048-73992065

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr113832 12 73901319 to 73901324 5 + TSS region transcription start site region 113832
Tssr113833 12 73901348 to 73901365 17 + TSS region transcription start site region 113833
Tssr113834 12 73901370 to 73901391 21 + TSS region transcription start site region 113834
Hif1a 12 73901375 to 73947530 46155 + protein coding gene hypoxia inducible factor 1, alpha subunit
Tssr113835 12 73901402 to 73901419 17 + TSS region transcription start site region 113835
Tssr113836 12 73901435 to 73901442 7 + TSS region transcription start site region 113836
Tssr113837 12 73902638 to 73902641 3 + TSS region transcription start site region 113837
Cpgi4761 12 73907347 to 73909014 1667 CpG island CpG island 4761
Tssr113838 12 73907959 to 73907970 11 + TSS region transcription start site region 113838
Tssr113839 12 73907974 to 73908015 41 + TSS region transcription start site region 113839
Tssr113840 12 73908055 to 73908066 11 + TSS region transcription start site region 113840
Tssr113841 12 73908160 to 73908170 10 + TSS region transcription start site region 113841
Tssr113842 12 73908185 to 73908236 51 + TSS region transcription start site region 113842
Tssr113843 12 73908375 to 73908381 6 + TSS region transcription start site region 113843
Tssr113844 12 73909612 to 73909620 8 + TSS region transcription start site region 113844
Tssr113845 12 73910085 to 73910119 34 + TSS region transcription start site region 113845
Tssr113846 12 73913109 to 73913120 11 + TSS region transcription start site region 113846
Tssr113847 12 73913497 to 73913531 34 + TSS region transcription start site region 113847
Tssr113848 12 73919346 to 73919356 10 + TSS region transcription start site region 113848
Tssr113849 12 73923102 to 73923105 3 + TSS region transcription start site region 113849
Tssr113850 12 73923239 to 73923250 11 + TSS region transcription start site region 113850
Tssr113851 12 73927363 to 73927375 12 + TSS region transcription start site region 113851
Tssr113852 12 73927412 to 73927423 11 + TSS region transcription start site region 113852
Tssr113853 12 73928197 to 73928211 14 + TSS region transcription start site region 113853
Tssr113854 12 73930699 to 73930711 12 + TSS region transcription start site region 113854
Tssr113855 12 73931560 to 73931571 11 + TSS region transcription start site region 113855
Gm15283 12 73934724 to 73952524 17800 - antisense lncRNA gene predicted gene 15283
Tssr113856 12 73936200 to 73936223 23 + TSS region transcription start site region 113856
Snapc1l 12 73937653 to 73968375 30722 + protein coding gene small nuclear RNA activating complex, polypeptide 1 like
Tssr113857 12 73937659 to 73937671 12 + TSS region transcription start site region 113857
Tssr113858 12 73937716 to 73937732 16 + TSS region transcription start site region 113858
Tssr113859 12 73940544 to 73940574 30 + TSS region transcription start site region 113859
Tssr113860 12 73940583 to 73940595 12 + TSS region transcription start site region 113860
Tssr113861 12 73941696 to 73941738 42 + TSS region transcription start site region 113861
Tssr113862 12 73941754 to 73941782 28 + TSS region transcription start site region 113862
Tssr113863 12 73941790 to 73941809 19 + TSS region transcription start site region 113863
Tssr113864 12 73941824 to 73941831 7 + TSS region transcription start site region 113864
Tssr113865 12 73941969 to 73941996 27 + TSS region transcription start site region 113865
Tssr113866 12 73942048 to 73942065 17 + TSS region transcription start site region 113866
Tssr113867 12 73942255 to 73942266 11 + TSS region transcription start site region 113867
Tssr113868 12 73945660 to 73945674 14 + TSS region transcription start site region 113868
Tssr113869 12 73945683 to 73945716 33 + TSS region transcription start site region 113869
Tssr113870 12 73945762 to 73945786 24 + TSS region transcription start site region 113870
Tssr113871 12 73945787 to 73945807 20 + TSS region transcription start site region 113871
Tssr113872 12 73946030 to 73946048 18 + TSS region transcription start site region 113872
Tssr113873 12 73946283 to 73946300 17 + TSS region transcription start site region 113873
Tssr113874 12 73946311 to 73946328 17 + TSS region transcription start site region 113874
Cpgi4762 12 73949633 to 73950105 472 CpG island CpG island 4762
Tssr116669 12 73949779 to 73949828 49 - TSS region transcription start site region 116669
Tssr116670 12 73949831 to 73949852 21 - TSS region transcription start site region 116670
Tssr113875 12 73961082 to 73961088 6 + TSS region transcription start site region 113875
S100a11-ps 12 73961148 to 73961447 299 + pseudogene S100 calcium binding protein A11, pseudogene
Cpgi4763 12 73964292 to 73965102 810 CpG island CpG island 4763
Snapc1 12 73964477 to 73985830 21353 + protein coding gene small nuclear RNA activating complex, polypeptide 1
Tssr113876 12 73964481 to 73964542 61 + TSS region transcription start site region 113876
Tssr113877 12 73964544 to 73964563 19 + TSS region transcription start site region 113877