Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:73099036-73302754

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Six4 12 73099609 to 73113456 13847 - protein coding gene sine oculis-related homeobox 4
Tssr116643 12 73102546 to 73102550 4 - TSS region transcription start site region 116643
Cpgi4752 12 73110907 to 73111063 156 CpG island CpG island 4752
Cpgi4753 12 73111591 to 73113535 1944 CpG island CpG island 4753
Tssr116644 12 73113407 to 73113435 28 - TSS region transcription start site region 116644
Cpgi4754 12 73123638 to 73124074 436 CpG island CpG island 4754
Tssr113781 12 73123694 to 73123705 11 + TSS region transcription start site region 113781
Tssr113782 12 73123709 to 73123761 52 + TSS region transcription start site region 113782
Mnat1 12 73123717 to 73273988 150271 + protein coding gene menage a trois 1
Gm23910 12 73145774 to 73145905 131 - snoRNA gene predicted gene, 23910
Tssr116645 12 73198566 to 73198574 8 - TSS region transcription start site region 116645
D630012G11Rik 12 73199036 to 73202754 3718 unclassified gene RIKEN cDNA D630012G11 gene
Tssr3859 12 73202011 to 73202053 42 + TSS region transcription start site region 3859
Tssr113783 12 73212078 to 73212083 5 + TSS region transcription start site region 113783
Tssr113784 12 73226915 to 73226916 1 + TSS region transcription start site region 113784
Gm20206 12 73236024 to 73237229 1205 - pseudogene predicted gene, 20206
Tssr113785 12 73261502 to 73261507 5 + TSS region transcription start site region 113785
Trmt5 12 73280011 to 73286710 6699 - protein coding gene TRM5 tRNA methyltransferase 5
Tssr116646 12 73284974 to 73284992 18 - TSS region transcription start site region 116646
Tssr116647 12 73284998 to 73285028 30 - TSS region transcription start site region 116647
Cpgi4755 12 73286401 to 73287224 823 CpG island CpG island 4755
Tssr116648 12 73286698 to 73286752 54 - TSS region transcription start site region 116648
Slc38a6 12 73286779 to 73354049 67270 + protein coding gene solute carrier family 38, member 6
Tssr113786 12 73286798 to 73286805 7 + TSS region transcription start site region 113786
Tssr113787 12 73286823 to 73286864 41 + TSS region transcription start site region 113787
Tssr113788 12 73286868 to 73286913 45 + TSS region transcription start site region 113788
Tssr116649 12 73287190 to 73287204 14 - TSS region transcription start site region 116649