Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 12:72845763-73045774

Filter by:
36 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppm1a 12 72804231 to 72846593 42362 + protein coding gene protein phosphatase 1A, magnesium dependent, alpha isoform
2900009J20Rik 12 72844254 to 72846592 2338 + lncRNA gene RIKEN cDNA 2900009J20 gene
Gm33785 12 72864486 to 72868597 4111 + lncRNA gene predicted gene, 33785
Cpgi4738 12 72867897 to 72868306 409 CpG island CpG island 4738
Cpgi4739 12 72878599 to 72879106 507 CpG island CpG island 4739
Gm40441 12 72882709 to 72891202 8493 - lncRNA gene predicted gene, 40441
Tssr113766 12 72891251 to 72891263 12 + TSS region transcription start site region 113766
Tssr116629 12 72892986 to 72892998 12 - TSS region transcription start site region 116629
Cpgi4740 12 72901273 to 72901642 369 CpG island CpG island 4740
4930447C04Rik 12 72926967 to 72964742 37775 - protein coding gene RIKEN cDNA 4930447C04 gene
Tssr116630 12 72954262 to 72954268 6 - TSS region transcription start site region 116630
Cpgi4741 12 72964084 to 72964641 557 CpG island CpG island 4741
Tssr116631 12 72964624 to 72964639 15 - TSS region transcription start site region 116631
Tssr116632 12 72964646 to 72964716 70 - TSS region transcription start site region 116632
Tssr116633 12 72985640 to 72985644 4 - TSS region transcription start site region 116633
Cpgi4742 12 72986353 to 72987317 964 CpG island CpG island 4742
Tssr116634 12 72986362 to 72986380 18 - TSS region transcription start site region 116634
Tssr113767 12 72986503 to 72986532 29 + TSS region transcription start site region 113767
Tssr116635 12 72986537 to 72986549 12 - TSS region transcription start site region 116635
Tssr113768 12 72986648 to 72986662 14 + TSS region transcription start site region 113768
Tssr3858 12 72986665 to 72986674 9 + TSS region transcription start site region 3858
Six6 12 72986666 to 72991673 5007 + protein coding gene sine oculis-related homeobox 6
Tssr113769 12 72986682 to 72986703 21 + TSS region transcription start site region 113769
Tssr113770 12 72986712 to 72986715 3 + TSS region transcription start site region 113770
Cpgi4743 12 72988201 to 72988764 563 CpG island CpG island 4743
Cpgi4744 12 72992132 to 72993163 1031 CpG island CpG island 4744
Tssr116636 12 72992217 to 72992240 23 - TSS region transcription start site region 116636
Tssr113771 12 72992406 to 72992417 11 + TSS region transcription start site region 113771
Tssr113772 12 72992452 to 72992462 10 + TSS region transcription start site region 113772
Tssr113773 12 72992464 to 72992471 7 + TSS region transcription start site region 113773
Tssr113774 12 72992474 to 72992484 10 + TSS region transcription start site region 113774
Tssr113775 12 72992537 to 72992548 11 + TSS region transcription start site region 113775
Tssr113776 12 72992561 to 72992574 13 + TSS region transcription start site region 113776
Gm26709 12 72992581 to 73012705 20124 + lncRNA gene predicted gene, 26709
Gm38170 12 72997669 to 72998484 815 + unclassified gene predicted gene, 38170
Cpgi4745 12 73023632 to 73023840 208 CpG island CpG island 4745