Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:72482946-72852947

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrc9 12 72433942 to 72517989 84047 + protein coding gene leucine rich repeat containing 9
Tssr116618 12 72490086 to 72490091 5 - TSS region transcription start site region 116618
Cpgi4733 12 72535990 to 72536655 665 CpG island CpG island 4733
Tssr113751 12 72536342 to 72536396 54 + TSS region transcription start site region 113751
Pcnx4 12 72536383 to 72580119 43736 + protein coding gene pecanex homolog 4
Gm4756 12 72620119 to 72629021 8902 - protein coding gene predicted gene 4756
Tssr113752 12 72620673 to 72620716 43 + TSS region transcription start site region 113752
Ly6e-ps1 12 72620775 to 72621141 366 + pseudogene lymphocyte antigen 6 complex, locus E, pseudogene 1
Tssr116619 12 72628833 to 72628840 7 - TSS region transcription start site region 116619
Tssr116620 12 72628851 to 72628866 15 - TSS region transcription start site region 116620
Tssr116621 12 72628868 to 72628887 19 - TSS region transcription start site region 116621
Tssr116622 12 72628896 to 72628907 11 - TSS region transcription start site region 116622
Tssr116623 12 72628929 to 72628938 9 - TSS region transcription start site region 116623
Tssr116624 12 72628956 to 72628965 9 - TSS region transcription start site region 116624
Dhrs7 12 72650353 to 72664828 14475 - protein coding gene dehydrogenase/reductase (SDR family) member 7
D12Mit274 12 72651766 to 72651889 123 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 274
Cpgi4734 12 72655875 to 72656054 179 CpG island CpG island 4734
Cpgi4735 12 72659057 to 72659307 250 CpG island CpG island 4735
Cpgi4736 12 72664459 to 72665246 787 CpG island CpG island 4736
Tssr116625 12 72664735 to 72664756 21 - TSS region transcription start site region 116625
Tssr116626 12 72664759 to 72664813 54 - TSS region transcription start site region 116626
Tssr113753 12 72664984 to 72664994 10 + TSS region transcription start site region 113753
Tssr113754 12 72665048 to 72665053 5 + TSS region transcription start site region 113754
Tssr116627 12 72667946 to 72667947 1 - TSS region transcription start site region 116627
Tssr113755 12 72668367 to 72668370 3 + TSS region transcription start site region 113755
Tssr113756 12 72735860 to 72735865 5 + TSS region transcription start site region 113756
Tssr113757 12 72735868 to 72735887 19 + TSS region transcription start site region 113757
Gm48143 12 72740555 to 72741582 1027 - pseudogene predicted gene, 48143
Tssr113758 12 72745743 to 72745767 24 + TSS region transcription start site region 113758
Tssr113759 12 72757382 to 72757410 28 + TSS region transcription start site region 113759
5033425G24Rik 12 72759771 to 72763525 3754 unclassified gene RIKEN cDNA 5033425G24 gene
Cpgi4737 12 72760421 to 72762122 1701 CpG island CpG island 4737
Tssr113760 12 72760521 to 72760529 8 + TSS region transcription start site region 113760
Tssr116628 12 72761042 to 72761090 48 - TSS region transcription start site region 116628
Tssr113761 12 72761129 to 72761140 11 + TSS region transcription start site region 113761
Ppm1a 12 72761211 to 72799819 38608 + protein coding gene protein phosphatase 1A, magnesium dependent, alpha isoform
Tssr113762 12 72761217 to 72761265 48 + TSS region transcription start site region 113762
Tssr113763 12 72761267 to 72761316 49 + TSS region transcription start site region 113763
Tssr113764 12 72765255 to 72765257 2 + TSS region transcription start site region 113764
Tssr113765 12 72792293 to 72792295 2 + TSS region transcription start site region 113765
2900009J20Rik 12 72797374 to 72799817 2443 unclassified gene RIKEN cDNA 2900009J20 gene
Gm33785 12 72817712 to 72821823 4111 + lincRNA gene predicted gene, 33785
Cpgi4738 12 72821123 to 72821532 409 CpG island CpG island 4738
Cpgi4739 12 72831825 to 72832332 507 CpG island CpG island 4739
Gm40441 12 72835935 to 72844522 8587 - lncRNA gene predicted gene, 40441
Tssr113766 12 72844477 to 72844489 12 + TSS region transcription start site region 113766
Tssr116629 12 72846212 to 72846224 12 - TSS region transcription start site region 116629