Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:71901893-72165193

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Daam1 12 71831078 to 71992333 161255 + protein coding gene dishevelled associated activator of morphogenesis 1
Tssr113738 12 71959657 to 71959659 2 + TSS region transcription start site region 113738
Tssr116581 12 72014529 to 72014530 1 - TSS region transcription start site region 116581
Gm40440 12 72026893 to 72040193 13300 - lncRNA gene predicted gene, 40440
Gm7986 12 72048709 to 72049259 550 - pseudogene predicted gene 7986
Gpr135 12 72069618 to 72070991 1373 - protein coding gene G protein-coupled receptor 135
Cpgi4724 12 72069788 to 72071457 1669 CpG island CpG island 4724
Gm3225 12 72070970 to 72072018 1048 protein coding gene predicted gene 3225
Tssr116582 12 72071067 to 72071079 12 - TSS region transcription start site region 116582
Tssr116583 12 72071093 to 72071106 13 - TSS region transcription start site region 116583
L3hypdh 12 72073428 to 72085439 12011 - protein coding gene L-3-hydroxyproline dehydratase (trans-)
Cpgi4725 12 72082459 to 72082711 252 CpG island CpG island 4725
Cpgi4726 12 72084450 to 72086395 1945 CpG island CpG island 4726
Tssr116584 12 72084713 to 72084745 32 - TSS region transcription start site region 116584
Tssr116585 12 72085308 to 72085320 12 - TSS region transcription start site region 116585
Tssr116586 12 72085334 to 72085361 27 - TSS region transcription start site region 116586
Tssr116587 12 72085369 to 72085389 20 - TSS region transcription start site region 116587
Tssr116588 12 72085393 to 72085418 25 - TSS region transcription start site region 116588
Jkamp 12 72085839 to 72101527 15688 + protein coding gene JNK1/MAPK8-associated membrane protein
Tssr113739 12 72085847 to 72085864 17 + TSS region transcription start site region 113739
Tssr113740 12 72086093 to 72086147 54 + TSS region transcription start site region 113740
Gm19135 12 72096432 to 72098104 1672 + pseudogene predicted gene, 19135
Ccdc175 12 72101300 to 72185029 83729 - protein coding gene coiled-coil domain containing 175
Tssr116589 12 72116259 to 72116264 5 - TSS region transcription start site region 116589
Gm18243 12 72120912 to 72121795 883 - pseudogene predicted gene, 18243
Gm24466 12 72130210 to 72130318 108 - miRNA gene predicted gene, 24466