Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:70039171-70298206

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nin 12 70011435 to 70113717 102282 - protein coding gene ninein
Tssr116547 12 70044412 to 70044420 8 - TSS region transcription start site region 116547
Tssr116548 12 70073793 to 70073798 5 - TSS region transcription start site region 116548
Tssr116549 12 70084158 to 70084162 4 - TSS region transcription start site region 116549
Vtbt13 12 70085228 to 70085371 143 QTL vertebral trabecular bone trait 13
D12Mit114 12 70085228 to 70085371 143 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 114
D12Dcr5 12 70085232 to 70085335 103 DNA segment DNA Segment, Chr 12, Derry C. Roopenian 5
Cpgi4706 12 70110779 to 70112592 1813 CpG island CpG island 4706
Tssr116550 12 70111258 to 70111274 16 - TSS region transcription start site region 116550
Tssr116551 12 70111290 to 70111301 11 - TSS region transcription start site region 116551
Tssr116552 12 70111574 to 70111588 14 - TSS region transcription start site region 116552
Tssr116553 12 70111948 to 70111959 11 - TSS region transcription start site region 116553
Tssr116554 12 70111965 to 70112039 74 - TSS region transcription start site region 116554
Gm48695 12 70113574 to 70115954 2380 + bidirectional promoter lncRNA gene predicted gene, 48695
Tssr116555 12 70113732 to 70113768 36 - TSS region transcription start site region 116555
Cpgi4707 12 70134688 to 70134869 181 CpG island CpG island 4707
Tssr116556 12 70136261 to 70136276 15 - TSS region transcription start site region 116556
Tssr113677 12 70154124 to 70154157 33 + TSS region transcription start site region 113677
Abhd12b 12 70154171 to 70183206 29035 + protein coding gene abhydrolase domain containing 12B
Pygl 12 70190815 to 70227683 36868 - protein coding gene liver glycogen phosphorylase
Tssr3855 12 70219437 to 70219452 15 + TSS region transcription start site region 3855
Cpgi4708 12 70227146 to 70227941 795 CpG island CpG island 4708
Tssr116557 12 70227430 to 70227454 24 - TSS region transcription start site region 116557
Tssr116558 12 70227622 to 70227639 17 - TSS region transcription start site region 116558
Tssr116559 12 70227658 to 70227669 11 - TSS region transcription start site region 116559
F730035M05Rik 12 70227841 to 70234165 6324 + lincRNA gene RIKEN cDNA F730035M05 gene
Gm38467 12 70229349 to 70233132 3783 - lncRNA gene predicted gene, 38467
Tssr116560 12 70231414 to 70231457 43 - TSS region transcription start site region 116560
Tssr116561 12 70232343 to 70232348 5 - TSS region transcription start site region 116561
Tssr113678 12 70233864 to 70233898 34 + TSS region transcription start site region 113678
Trim9 12 70244533 to 70347614 103081 - protein coding gene tripartite motif-containing 9
Cpgi4709 12 70246163 to 70246484 321 CpG island CpG island 4709
Gm48747 12 70251165 to 70275597 24432 + antisense lncRNA gene predicted gene, 48747
Tssr116562 12 70263435 to 70263446 11 - TSS region transcription start site region 116562
Tssr116563 12 70269237 to 70269240 3 - TSS region transcription start site region 116563
Tssr116564 12 70280653 to 70280661 8 - TSS region transcription start site region 116564