Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:69779852-69820022

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cdkl1	12	69746848 to 69791267	44419	-	protein coding gene	cyclin-dependent kinase-like 1 (CDC2-related kinase)
Tssr116527	12	69790255 to 69790273	18	-	TSS region	transcription start site region 116527
Tssr116528	12	69790274 to 69790276	2	-	TSS region	transcription start site region 116528
Tssr116529	12	69790281 to 69790298	17	-	TSS region	transcription start site region 116529
4930512B01Rik	12	69790288 to 69840479	50191	+	lncRNA gene	RIKEN cDNA 4930512B01 gene
Cpgi4702	12	69790472 to 69791400	928		CpG island	CpG island 4702
Tssr116530	12	69790605 to 69790631	26	-	TSS region	transcription start site region 116530
Tssr116531	12	69790660 to 69790735	75	-	TSS region	transcription start site region 116531
Tssr116532	12	69791229 to 69791293	64	-	TSS region	transcription start site region 116532
Tssr116533	12	69791294 to 69791295	1	-	TSS region	transcription start site region 116533
Tssr116534	12	69791311 to 69791323	12	-	TSS region	transcription start site region 116534
Tssr116535	12	69791325 to 69791338	13	-	TSS region	transcription start site region 116535
Tssr116536	12	69791353 to 69791364	11	-	TSS region	transcription start site region 116536
Lnopy2	12	69799852 to 69800022	170		QTL	lens opacity 2
D12Mit34	12	69799852 to 69800022	170		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 34
Map4k5	12	69803757 to 69893170	89413	-	protein coding gene	mitogen-activated protein kinase kinase kinase kinase 5
Gm18030	12	69819647 to 69820377	730	+	pseudogene	predicted gene, 18030