Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:69743757-69953170

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dmac2l 12 69724950 to 69744660 19710 + protein coding gene distal membrane arm assembly complex 2 like
Tssr116522 12 69746335 to 69746345 10 - TSS region transcription start site region 116522
Cdkl1 12 69746848 to 69791267 44419 - protein coding gene cyclin-dependent kinase-like 1 (CDC2-related kinase)
Cpgi4701 12 69757818 to 69758162 344 CpG island CpG island 4701
Tssr116523 12 69758647 to 69758673 26 - TSS region transcription start site region 116523
Mir681 12 69763835 to 69763944 109 - miRNA gene microRNA 681
Tssr116524 12 69767287 to 69767292 5 - TSS region transcription start site region 116524
Tssr116525 12 69769303 to 69769307 4 - TSS region transcription start site region 116525
Tssr116526 12 69769733 to 69769742 9 - TSS region transcription start site region 116526
Tssr116527 12 69790255 to 69790273 18 - TSS region transcription start site region 116527
Tssr116528 12 69790274 to 69790276 2 - TSS region transcription start site region 116528
Tssr116529 12 69790281 to 69790298 17 - TSS region transcription start site region 116529
4930512B01Rik 12 69790288 to 69840479 50191 + lncRNA gene RIKEN cDNA 4930512B01 gene
Cpgi4702 12 69790472 to 69791400 928 CpG island CpG island 4702
Tssr116530 12 69790605 to 69790631 26 - TSS region transcription start site region 116530
Tssr116531 12 69790660 to 69790735 75 - TSS region transcription start site region 116531
Tssr116532 12 69791229 to 69791293 64 - TSS region transcription start site region 116532
Tssr116533 12 69791294 to 69791295 1 - TSS region transcription start site region 116533
Tssr116534 12 69791311 to 69791323 12 - TSS region transcription start site region 116534
Tssr116535 12 69791325 to 69791338 13 - TSS region transcription start site region 116535
Tssr116536 12 69791353 to 69791364 11 - TSS region transcription start site region 116536
Lnopy2 12 69799852 to 69800022 170 QTL lens opacity 2
D12Mit34 12 69799852 to 69800022 170 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 34
Map4k5 12 69803757 to 69893170 89413 - protein coding gene mitogen-activated protein kinase kinase kinase kinase 5
Gm18030 12 69819647 to 69820377 730 + pseudogene predicted gene, 18030
Tssr113655 12 69843669 to 69843695 26 + TSS region transcription start site region 113655
4931403G20Rik 12 69847635 to 69853671 6036 + lincRNA gene RIKEN cDNA 4931403G20 gene
Cpgi4703 12 69892325 to 69893543 1218 CpG island CpG island 4703
Tssr116537 12 69892779 to 69892792 13 - TSS region transcription start site region 116537
Tssr116538 12 69892989 to 69893082 93 - TSS region transcription start site region 116538
Atl1 12 69893105 to 69964085 70980 + protein coding gene atlastin GTPase 1
Tssr116539 12 69893134 to 69893151 17 - TSS region transcription start site region 116539
Tssr116540 12 69893162 to 69893176 14 - TSS region transcription start site region 116540
Tssr113656 12 69893221 to 69893276 55 + TSS region transcription start site region 113656
Tssr113657 12 69907734 to 69907745 11 + TSS region transcription start site region 113657
Tssr113658 12 69907747 to 69907754 7 + TSS region transcription start site region 113658
Tssr113659 12 69907793 to 69907808 15 + TSS region transcription start site region 113659
Tssr113660 12 69907817 to 69907826 9 + TSS region transcription start site region 113660
Tssr113661 12 69907828 to 69907843 15 + TSS region transcription start site region 113661
Cpgi4704 12 69907848 to 69908862 1014 CpG island CpG island 4704
Tssr113662 12 69907853 to 69907863 10 + TSS region transcription start site region 113662
Tssr113663 12 69907882 to 69907889 7 + TSS region transcription start site region 113663
Tssr113664 12 69907900 to 69907910 10 + TSS region transcription start site region 113664
Tssr113665 12 69907937 to 69907940 3 + TSS region transcription start site region 113665
Gm6316 12 69920472 to 69921491 1019 - pseudogene predicted pseudogene 6316
Tssr113666 12 69930903 to 69930906 3 + TSS region transcription start site region 113666
Gm22058 12 69930904 to 69931213 309 + unclassified non-coding RNA gene predicted gene, 22058
Tssr113667 12 69946142 to 69946159 17 + TSS region transcription start site region 113667
Tssr113668 12 69946169 to 69946193 24 + TSS region transcription start site region 113668