Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:69367067-69636741

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm18113 12 69369514 to 69370023 509 - pseudogene predicted gene, 18113
Cpgi4696 12 69371514 to 69373313 1799 CpG island CpG island 4696
Gm9887 12 69371835 to 69372458 623 - protein coding gene predicted gene 9887
Tssr116505 12 69371942 to 69372007 65 - TSS region transcription start site region 116505
Tssr113640 12 69372051 to 69372062 11 + TSS region transcription start site region 113640
Tssr113641 12 69372112 to 69372172 60 + TSS region transcription start site region 113641
Arf6 12 69372150 to 69373783 1633 + protein coding gene ADP-ribosylation factor 6
Tssr116506 12 69372443 to 69372540 97 - TSS region transcription start site region 116506
Tssr113642 12 69372545 to 69372645 100 + TSS region transcription start site region 113642
Tssr113643 12 69373493 to 69373507 14 + TSS region transcription start site region 113643
Tssr113644 12 69374597 to 69374621 24 + TSS region transcription start site region 113644
Tssr113645 12 69374899 to 69374910 11 + TSS region transcription start site region 113645
Tssr113646 12 69375573 to 69375577 4 + TSS region transcription start site region 113646
Tssr116507 12 69402842 to 69402847 5 - TSS region transcription start site region 116507
Tssr113647 12 69447708 to 69447712 4 + TSS region transcription start site region 113647
Gm40434 12 69461787 to 69462846 1059 + lncRNA gene predicted gene, 40434
5830428M24Rik 12 69464787 to 69475550 10763 - lncRNA gene RIKEN cDNA 5830428M24 gene
Tssr116508 12 69475510 to 69475555 45 - TSS region transcription start site region 116508
Tssr116509 12 69475567 to 69475588 21 - TSS region transcription start site region 116509
Cpgi4697 12 69476860 to 69477066 206 CpG island CpG island 4697
Gm31512 12 69497067 to 69506741 9674 + lncRNA gene predicted gene, 31512
Tssr113648 12 69502537 to 69502588 51 + TSS region transcription start site region 113648
Tssr116510 12 69537841 to 69537851 10 - TSS region transcription start site region 116510
Tssr113649 12 69538188 to 69538193 5 + TSS region transcription start site region 113649
Tssr113650 12 69538286 to 69538299 13 + TSS region transcription start site region 113650
Tssr116511 12 69541736 to 69541745 9 - TSS region transcription start site region 116511
Gm46353 12 69551118 to 69554519 3401 + protein coding gene predicted gene, 46353
Gm23018 12 69561229 to 69561337 108 - miRNA gene predicted gene, 23018
Vcpkmt 12 69577628 to 69583028 5400 - protein coding gene valosin containing protein lysine (K) methyltransferase
Cpgi4698 12 69582242 to 69583400 1158 CpG island CpG island 4698
Tssr116512 12 69582985 to 69583050 65 - TSS region transcription start site region 116512
Sos2 12 69583762 to 69681852 98090 - protein coding gene SOS Ras/Rho guanine nucleotide exchange factor 2
Tssr116513 12 69584546 to 69584580 34 - TSS region transcription start site region 116513
Gm24449 12 69586153 to 69586258 105 - snRNA gene predicted gene, 24449
Tssr116514 12 69596819 to 69596822 3 - TSS region transcription start site region 116514
Tssr113651 12 69597760 to 69597767 7 + TSS region transcription start site region 113651
Tssr116515 12 69607307 to 69607316 9 - TSS region transcription start site region 116515
Gm31679 12 69622309 to 69625603 3294 - protein coding gene predicted gene, 31679