Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:69079836-69195076

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4685 12 69087600 to 69087969 369 CpG island CpG island 4685
Gm47518 12 69115014 to 69120347 5333 - lincRNA gene predicted gene, 47518
Tssr113616 12 69122974 to 69122986 12 + TSS region transcription start site region 113616
Gm7868 12 69123101 to 69123777 676 + pseudogene predicted gene 7868
Tssr113617 12 69129829 to 69129860 31 + TSS region transcription start site region 113617
Gm31447 12 69129836 to 69145076 15240 + lincRNA gene predicted gene, 31447
Gm15571 12 69141430 to 69142066 636 - pseudogene predicted gene 15571
Gm24499 12 69152274 to 69152377 103 - snRNA gene predicted gene, 24499
Rps29 12 69157722 to 69159186 1464 - protein coding gene ribosomal protein S29
Cpgi4686 12 69158517 to 69159322 805 CpG island CpG island 4686
Tssr116482 12 69159109 to 69159133 24 - TSS region transcription start site region 116482
Tssr113618 12 69159281 to 69159296 15 + TSS region transcription start site region 113618
Rn7s1 12 69159295 to 69159593 298 + SRP RNA gene 7S RNA 1
Gm47287 12 69159437 to 69159506 69 + miRNA gene predicted gene, 47287
Gm47295 12 69159518 to 69159596 78 + miRNA gene predicted gene, 47295
Cpgi4687 12 69168485 to 69169246 761 CpG island CpG island 4687
Tssr113619 12 69168808 to 69168839 31 + TSS region transcription start site region 113619
Lrr1 12 69168814 to 69179009 10195 + protein coding gene leucine rich repeat protein 1
Tssr113620 12 69168841 to 69168854 13 + TSS region transcription start site region 113620
Rpl36al 12 69182734 to 69184067 1333 - protein coding gene ribosomal protein L36A-like
Gm49383 12 69182834 to 69197104 14270 - protein coding gene predicted gene, 49383
Cpgi4688 12 69183499 to 69185313 1814 CpG island CpG island 4688
Tssr116483 12 69184025 to 69184051 26 - TSS region transcription start site region 116483
Tssr116484 12 69184056 to 69184065 9 - TSS region transcription start site region 116484
Mgat2 12 69184157 to 69186770 2613 + protein coding gene mannoside acetylglucosaminyltransferase 2
Tssr113621 12 69184159 to 69184170 11 + TSS region transcription start site region 113621
Tssr113622 12 69184177 to 69184218 41 + TSS region transcription start site region 113622
Tssr116485 12 69184420 to 69184438 18 - TSS region transcription start site region 116485
Tssr116486 12 69184439 to 69184460 21 - TSS region transcription start site region 116486
Dnaaf2 12 69189087 to 69198429 9342 - protein coding gene dynein, axonemal assembly factor 2
Gm49384 12 69189839 to 69204267 14428 - protein coding gene predicted gene, 49384
D12Mit70 12 69190446 to 69190616 170 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 70