Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:6847425-7988124

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46311 12 6966758 to 6966960 202 - pseudogene predicted gene, 46311
D12Mit197 12 7242998 to 7243119 121 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 197
Gm32773 12 7289086 to 7298731 9645 - lncRNA gene predicted gene, 32773
Tssr3775 12 7351879 to 7351882 3 + TSS region transcription start site region 3775
1700101O22Rik 12 7372039 to 7380330 8291 - lincRNA gene RIKEN cDNA 1700101O22 gene
Tssr112605 12 7379886 to 7379909 23 + TSS region transcription start site region 112605
Tssr115685 12 7380308 to 7380321 13 - TSS region transcription start site region 115685
Tssr115686 12 7380324 to 7380361 37 - TSS region transcription start site region 115686
Tssr115687 12 7380374 to 7380377 3 - TSS region transcription start site region 115687
Tssr115688 12 7381565 to 7381570 5 - TSS region transcription start site region 115688
Gm9139 12 7417425 to 7418124 699 - pseudogene predicted gene 9139
Tssr115689 12 7555365 to 7555366 1 - TSS region transcription start site region 115689
Tssr112606 12 7597934 to 7597935 1 + TSS region transcription start site region 112606
Vtbt12 12 7612573 to 7612697 124 QTL vertebral trabecular bone trait 12
Bmd12 12 7612573 to 7612697 124 QTL bone mineral density 12
D12Mit215 12 7612573 to 7612697 124 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 215
Tssr115690 12 7681638 to 7681641 3 - TSS region transcription start site region 115690
Gm32828 12 7754915 to 7859630 104715 - lincRNA gene predicted gene, 32828
Tssr3776 12 7854079 to 7854081 2 - TSS region transcription start site region 3776
Gm9144 12 7859900 to 7860907 1007 + pseudogene predicted gene 9144
Tssr115691 12 7876428 to 7876435 7 - TSS region transcription start site region 115691
Gm18337 12 7880510 to 7883870 3360 - pseudogene predicted gene, 18337
Gm18387 12 7897573 to 7898274 701 + pseudogene predicted gene, 18387
Tssr115692 12 7901606 to 7901616 10 - TSS region transcription start site region 115692
Tssr115693 12 7901637 to 7901652 15 - TSS region transcription start site region 115693
Tssr115694 12 7901656 to 7901665 9 - TSS region transcription start site region 115694
Gm48633 12 7911889 to 7950061 38172 - lincRNA gene predicted gene, 48633
Tssr115695 12 7950055 to 7950089 34 - TSS region transcription start site region 115695
Tssr115696 12 7950123 to 7950146 23 - TSS region transcription start site region 115696
Tssr115697 12 7950147 to 7950169 22 - TSS region transcription start site region 115697
Tssr112607 12 7977640 to 7977654 14 + TSS region transcription start site region 112607
Apob 12 7977648 to 8016835 39187 + protein coding gene apolipoprotein B
Tssr3777 12 7977689 to 7977703 14 + TSS region transcription start site region 3777
Tssr3778 12 7977730 to 7977741 11 + TSS region transcription start site region 3778
Tssr112608 12 7977750 to 7977755 5 + TSS region transcription start site region 112608
Tssr3779 12 7977767 to 7977792 25 + TSS region transcription start site region 3779
Tssr115698 12 7979296 to 7979320 24 - TSS region transcription start site region 115698
Tssr115699 12 7979371 to 7979378 7 - TSS region transcription start site region 115699
Tssr112609 12 7980499 to 7980535 36 + TSS region transcription start site region 112609
Tssr112610 12 7980560 to 7980576 16 + TSS region transcription start site region 112610
Tssr112611 12 7980582 to 7980599 17 + TSS region transcription start site region 112611
Tssr112612 12 7983027 to 7983038 11 + TSS region transcription start site region 112612
Tssr112613 12 7983114 to 7983128 14 + TSS region transcription start site region 112613
Tssr112614 12 7983914 to 7983934 20 + TSS region transcription start site region 112614
Tssr112615 12 7985278 to 7985302 24 + TSS region transcription start site region 112615
Tssr112616 12 7985342 to 7985373 31 + TSS region transcription start site region 112616
Tssr112617 12 7987740 to 7987782 42 + TSS region transcription start site region 112617
Tssr112618 12 7987789 to 7987800 11 + TSS region transcription start site region 112618