Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:65434394-67134412

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa10 12 35041005 to 65464245 30423240 QTL B.burgdorferi-associated arthritis 10
D12Mit69 12 65464142 to 65464245 103 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 69
D12Mit68 12 65475933 to 65476114 181 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 68
Gm25599 12 65530252 to 65530354 102 + snRNA gene predicted gene, 25599
Gm23948 12 65562163 to 65562294 131 - snoRNA gene predicted gene, 23948
Gm22782 12 65566090 to 65566221 131 + snoRNA gene predicted gene, 22782
Gm47975 12 65968376 to 65968601 225 + unclassified gene predicted gene, 47975
Gm2915 12 66269265 to 66270051 786 + pseudogene predicted gene 2915
Rpl10l 12 66283379 to 66284401 1022 - protein coding gene ribosomal protein L10-like
Cpgi4682 12 66283881 to 66284503 622 CpG island CpG island 4682
Tssr116470 12 66284394 to 66284412 18 - TSS region transcription start site region 116470
Tssr116471 12 66284416 to 66284429 13 - TSS region transcription start site region 116471
Gm47979 12 66333502 to 66368385 34883 - lincRNA gene predicted gene, 47979
Tssr3852 12 66420994 to 66420999 5 + TSS region transcription start site region 3852
Gm47982 12 66456103 to 66458442 2339 - unclassified gene predicted gene, 47982
Mdga2 12 66466060 to 67222549 756489 - protein coding gene MAM domain containing glycosylphosphatidylinositol anchor 2
Gm19001 12 66482506 to 66484156 1650 + pseudogene predicted gene, 19001
Gm47988 12 66501762 to 66502546 784 - unclassified gene predicted gene, 47988
Tssr116472 12 66560952 to 66560981 29 - TSS region transcription start site region 116472
Gm23826 12 66561254 to 66561372 118 - snoRNA gene predicted gene, 23826
B230119K15Rik 12 66572707 to 66573988 1281 unclassified gene RIKEN cDNA B230119K15 gene
Gm18940 12 66845590 to 66846460 870 + pseudogene predicted gene, 18940
Gm47989 12 66942411 to 66942521 110 + unclassified gene predicted gene, 47989
Tssr113612 12 66952224 to 66952236 12 + TSS region transcription start site region 113612
Tssr113613 12 67059181 to 67059193 12 + TSS region transcription start site region 113613
Cpgi4683 12 67059204 to 67059588 384 CpG island CpG island 4683
Tssr3853 12 67059250 to 67059297 47 + TSS region transcription start site region 3853
Tssr116473 12 67059401 to 67059451 50 - TSS region transcription start site region 116473
Tssr116474 12 67059897 to 67059923 26 - TSS region transcription start site region 116474
Tssr116475 12 67082116 to 67082123 7 - TSS region transcription start site region 116475
Tssr116476 12 67110586 to 67110589 3 - TSS region transcription start site region 116476
Gm47987 12 67120126 to 67122920 2794 - unclassified gene predicted gene, 47987
Tssr116477 12 67122899 to 67122902 3 - TSS region transcription start site region 116477