MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:65190846-65620970

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Bbaa10	12	35041005 to 65464245	30423240		QTL	B.burgdorferi-associated arthritis 10
Gm31063	12	65190613 to 65202551	11938	-	lincRNA gene	predicted gene, 31063
Tssr116469	12	65213506 to 65213514	8	-	TSS region	transcription start site region 116469
Tssr113608	12	65225483 to 65225494	11	+	TSS region	transcription start site region 113608
Tssr113609	12	65225513 to 65225544	31	+	TSS region	transcription start site region 113609
Wdr20rt	12	65225517 to 65228454	2937	+	protein coding gene	WD repeat domain 20, retrogene
Cpgi4680	12	65225646 to 65226230	584		CpG island	CpG island 4680
Tssr113610	12	65225723 to 65225744	21	+	TSS region	transcription start site region 113610
Tssr113611	12	65225747 to 65225757	10	+	TSS region	transcription start site region 113611
Cpgi4681	12	65226825 to 65227000	175		CpG island	CpG island 4681
Gm47973	12	65251710 to 65251908	198	+	pseudogene	predicted gene, 47973
Gm26015	12	65405846 to 65405970	124	-	snoRNA gene	predicted gene, 26015
D12Mit210	12	65424881 to 65425026	145		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 210
D12Mit69	12	65464142 to 65464245	103		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 69
D12Mit68	12	65475933 to 65476114	181		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 68
Gm25599	12	65530252 to 65530354	102	+	snRNA gene	predicted gene, 25599
Gm23948	12	65562163 to 65562294	131	-	snoRNA gene	predicted gene, 23948
Gm22782	12	65566090 to 65566221	131	+	snoRNA gene	predicted gene, 22782