Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:65125517-65328454

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Fancm	12	65075603 to 65132058	56455	+	protein coding gene	Fanconi anemia, complementation group M
Mis18bp1	12	65132734 to 65172580	39846	-	protein coding gene	MIS18 binding protein 1
Tssr116466	12	65159203 to 65159205	2	-	TSS region	transcription start site region 116466
Cpgi4679	12	65172218 to 65172955	737		CpG island	CpG island 4679
Tssr116467	12	65172541 to 65172552	11	-	TSS region	transcription start site region 116467
Tssr116468	12	65172560 to 65172618	58	-	TSS region	transcription start site region 116468
4930471E15Rik	12	65182380 to 65186387	4007	+	lincRNA gene	RIKEN cDNA 4930471E15 gene
Tssr113607	12	65182562 to 65182572	10	+	TSS region	transcription start site region 113607
Gm31063	12	65190613 to 65202551	11938	-	lincRNA gene	predicted gene, 31063
Tssr116469	12	65213506 to 65213514	8	-	TSS region	transcription start site region 116469
Tssr113608	12	65225483 to 65225494	11	+	TSS region	transcription start site region 113608
Tssr113609	12	65225513 to 65225544	31	+	TSS region	transcription start site region 113609
Wdr20rt	12	65225517 to 65228454	2937	+	protein coding gene	WD repeat domain 20, retrogene
Cpgi4680	12	65225646 to 65226230	584		CpG island	CpG island 4680
Tssr113610	12	65225723 to 65225744	21	+	TSS region	transcription start site region 113610
Tssr113611	12	65225747 to 65225757	10	+	TSS region	transcription start site region 113611
Cpgi4681	12	65226825 to 65227000	175		CpG island	CpG island 4681
Gm47973	12	65251710 to 65251908	198	+	pseudogene	predicted gene, 47973