Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:65119394-67449412

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa10 12 35041005 to 65464245 30423240 QTL B.burgdorferi-associated arthritis 10
Fancm 12 65075603 to 65132058 56455 + protein coding gene Fanconi anemia, complementation group M
Mis18bp1 12 65132734 to 65172580 39846 - protein coding gene MIS18 binding protein 1
Tssr116466 12 65159203 to 65159205 2 - TSS region transcription start site region 116466
Cpgi4679 12 65172218 to 65172955 737 CpG island CpG island 4679
Tssr116467 12 65172541 to 65172552 11 - TSS region transcription start site region 116467
Tssr116468 12 65172560 to 65172618 58 - TSS region transcription start site region 116468
4930471E15Rik 12 65182380 to 65186387 4007 + lincRNA gene RIKEN cDNA 4930471E15 gene
Tssr113607 12 65182562 to 65182572 10 + TSS region transcription start site region 113607
Gm31063 12 65190613 to 65202551 11938 - lincRNA gene predicted gene, 31063
Tssr116469 12 65213506 to 65213514 8 - TSS region transcription start site region 116469
Tssr113608 12 65225483 to 65225494 11 + TSS region transcription start site region 113608
Tssr113609 12 65225513 to 65225544 31 + TSS region transcription start site region 113609
Wdr20rt 12 65225517 to 65228454 2937 + protein coding gene WD repeat domain 20, retrogene
Cpgi4680 12 65225646 to 65226230 584 CpG island CpG island 4680
Tssr113610 12 65225723 to 65225744 21 + TSS region transcription start site region 113610
Tssr113611 12 65225747 to 65225757 10 + TSS region transcription start site region 113611
Cpgi4681 12 65226825 to 65227000 175 CpG island CpG island 4681
Gm47973 12 65251710 to 65251908 198 + pseudogene predicted gene, 47973
Gm26015 12 65405846 to 65405970 124 - snoRNA gene predicted gene, 26015
D12Mit210 12 65424881 to 65425026 145 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 210
D12Mit69 12 65464142 to 65464245 103 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 69
D12Mit68 12 65475933 to 65476114 181 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 68
Gm25599 12 65530252 to 65530354 102 + snRNA gene predicted gene, 25599
Gm23948 12 65562163 to 65562294 131 - snoRNA gene predicted gene, 23948
Gm22782 12 65566090 to 65566221 131 + snoRNA gene predicted gene, 22782
Gm47975 12 65968376 to 65968601 225 + unclassified gene predicted gene, 47975
Gm2915 12 66269265 to 66270051 786 + pseudogene predicted gene 2915
Rpl10l 12 66283379 to 66284401 1022 - protein coding gene ribosomal protein L10-like
Cpgi4682 12 66283881 to 66284503 622 CpG island CpG island 4682
Tssr116470 12 66284394 to 66284412 18 - TSS region transcription start site region 116470
Tssr116471 12 66284416 to 66284429 13 - TSS region transcription start site region 116471
Gm47979 12 66333502 to 66368385 34883 - lincRNA gene predicted gene, 47979
Tssr3852 12 66420994 to 66420999 5 + TSS region transcription start site region 3852
Gm47982 12 66456103 to 66458442 2339 - unclassified gene predicted gene, 47982
Mdga2 12 66466060 to 67222549 756489 - protein coding gene MAM domain containing glycosylphosphatidylinositol anchor 2
Gm19001 12 66482506 to 66484156 1650 + pseudogene predicted gene, 19001
Gm47988 12 66501762 to 66502546 784 - unclassified gene predicted gene, 47988
Tssr116472 12 66560952 to 66560981 29 - TSS region transcription start site region 116472
Gm23826 12 66561254 to 66561372 118 - snoRNA gene predicted gene, 23826
B230119K15Rik 12 66572707 to 66573988 1281 unclassified gene RIKEN cDNA B230119K15 gene
Gm18940 12 66845590 to 66846460 870 + pseudogene predicted gene, 18940
Gm47989 12 66942411 to 66942521 110 + unclassified gene predicted gene, 47989
Tssr113612 12 66952224 to 66952236 12 + TSS region transcription start site region 113612
Tssr113613 12 67059181 to 67059193 12 + TSS region transcription start site region 113613
Cpgi4683 12 67059204 to 67059588 384 CpG island CpG island 4683
Tssr3853 12 67059250 to 67059297 47 + TSS region transcription start site region 3853
Tssr116473 12 67059401 to 67059451 50 - TSS region transcription start site region 116473
Tssr116474 12 67059897 to 67059923 26 - TSS region transcription start site region 116474
Tssr116475 12 67082116 to 67082123 7 - TSS region transcription start site region 116475
Tssr116476 12 67110586 to 67110589 3 - TSS region transcription start site region 116476
Gm47987 12 67120126 to 67122920 2794 - unclassified gene predicted gene, 47987
Tssr116477 12 67122899 to 67122902 3 - TSS region transcription start site region 116477
Tssr116478 12 67193940 to 67193983 43 - TSS region transcription start site region 116478
Tssr116479 12 67209520 to 67209524 4 - TSS region transcription start site region 116479
Cpgi4684 12 67220670 to 67223016 2346 CpG island CpG island 4684
Tssr116480 12 67222550 to 67222578 28 - TSS region transcription start site region 116480
Tssr116481 12 67222589 to 67222600 11 - TSS region transcription start site region 116481
Gm48059 12 67345588 to 67345750 162 - pseudogene predicted gene, 48059
Gm48060 12 67427947 to 67428244 297 - pseudogene predicted gene, 48060