Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:64893089-65333104

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4674 12 64917645 to 64918655 1010 CpG island CpG island 4674
Tssr113591 12 64917838 to 64917870 32 + TSS region transcription start site region 113591
Tssr113592 12 64917901 to 64917944 43 + TSS region transcription start site region 113592
Gm527 12 64917911 to 64924591 6680 + protein coding gene predicted gene 527
Tssr113593 12 64917945 to 64917989 44 + TSS region transcription start site region 113593
Tssr113594 12 64917991 to 64918001 10 + TSS region transcription start site region 113594
Klhl28 12 64941486 to 64965605 24119 - protein coding gene kelch-like 28
Tssr116461 12 64963364 to 64963374 10 - TSS region transcription start site region 116461
Cpgi4675 12 64965451 to 64966692 1241 CpG island CpG island 4675
Tssr116462 12 64965496 to 64965538 42 - TSS region transcription start site region 116462
Tssr113595 12 64965756 to 64965775 19 + TSS region transcription start site region 113595
Tssr113596 12 64965777 to 64965788 11 + TSS region transcription start site region 113596
Tssr113597 12 64965791 to 64965810 19 + TSS region transcription start site region 113597
Togaram1 12 64965804 to 65022573 56769 + protein coding gene TOG array regulator of axonemal microtubules 1
Tssr113598 12 64969301 to 64969308 7 + TSS region transcription start site region 113598
Gm48559 12 64980630 to 64982936 2306 - antisense lncRNA gene predicted gene, 48559
Tssr113599 12 65021819 to 65021835 16 + TSS region transcription start site region 113599
Cpgi4676 12 65036155 to 65036786 631 CpG island CpG island 4676
Tssr113600 12 65036319 to 65036358 39 + TSS region transcription start site region 113600
Prpf39 12 65036333 to 65063386 27053 + protein coding gene pre-mRNA processing factor 39
Tssr113601 12 65036827 to 65036833 6 + TSS region transcription start site region 113601
Tssr113602 12 65039732 to 65039742 10 + TSS region transcription start site region 113602
Tssr113603 12 65049188 to 65049198 10 + TSS region transcription start site region 113603
Gm25970 12 65056573 to 65056658 85 + snoRNA gene predicted gene, 25970
Tssr113604 12 65061731 to 65061734 3 + TSS region transcription start site region 113604
Fkbp3 12 65062432 to 65073938 11506 - protein coding gene FK506 binding protein 3
Tssr116463 12 65066667 to 65066716 49 - TSS region transcription start site region 116463
Tssr116464 12 65071099 to 65071102 3 - TSS region transcription start site region 116464
Cpgi4677 12 65073353 to 65074339 986 CpG island CpG island 4677
Tssr116465 12 65073927 to 65073954 27 - TSS region transcription start site region 116465
Gm47870 12 65074990 to 65076315 1325 - unclassified gene predicted gene, 47870
Cpgi4678 12 65075345 to 65076177 832 CpG island CpG island 4678
Tssr113605 12 65075582 to 65075617 35 + TSS region transcription start site region 113605
Fancm 12 65075603 to 65132058 56455 + protein coding gene Fanconi anemia, complementation group M
Gm47869 12 65099844 to 65100006 162 - pseudogene predicted gene, 47869
Tssr113606 12 65113089 to 65113104 15 + TSS region transcription start site region 113606
Mis18bp1 12 65132734 to 65172580 39846 - protein coding gene MIS18 binding protein 1
Tssr116466 12 65159203 to 65159205 2 - TSS region transcription start site region 116466
Cpgi4679 12 65172218 to 65172955 737 CpG island CpG island 4679
Tssr116467 12 65172541 to 65172552 11 - TSS region transcription start site region 116467
Tssr116468 12 65172560 to 65172618 58 - TSS region transcription start site region 116468
4930471E15Rik 12 65182380 to 65186387 4007 + lincRNA gene RIKEN cDNA 4930471E15 gene
Tssr113607 12 65182562 to 65182572 10 + TSS region transcription start site region 113607
Gm31063 12 65190613 to 65202551 11938 - lincRNA gene predicted gene, 31063
Tssr116469 12 65213506 to 65213514 8 - TSS region transcription start site region 116469
Tssr113608 12 65225483 to 65225494 11 + TSS region transcription start site region 113608
Tssr113609 12 65225513 to 65225544 31 + TSS region transcription start site region 113609
Wdr20rt 12 65225517 to 65228454 2937 + protein coding gene WD repeat domain 20, retrogene
Cpgi4680 12 65225646 to 65226230 584 CpG island CpG island 4680
Tssr113610 12 65225723 to 65225744 21 + TSS region transcription start site region 113610
Tssr113611 12 65225747 to 65225757 10 + TSS region transcription start site region 113611
Cpgi4681 12 65226825 to 65227000 175 CpG island CpG island 4681
Gm47973 12 65251710 to 65251908 198 + pseudogene predicted gene, 47973